AT1G45688.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17191502..17192870 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37203.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.52 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||
| Length | 342 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHAKTDSEVT SLAASSPARS PRRPVYYVQS PSRDSHDGEK TATSFHSTPV LSPMGSPPHS HSSMGRHSRE SSSSRFSGSL KPGSRKVNPN DGSKRKGHGG 101: EKQWKECAVI EEEGLLDDGD RDGGVPRRCY VLAFIVGFFI LFGFFSLILY GAAKPMKPKI TVKSITFETL KIQAGQDAGG VGTDMITMNA TLRMLYRNTG 201: TFFGVHVTST PIDLSFSQIK IGSGSVKKFY QGRKSERTVL VHVIGEKIPL YGSGSTLLPP APPAPLPKPK KKKGAPVPIP DPPAPPAPVP MTLSFVVRSR 301: AYVLGKLVQP KFYKKIECDI NFEHKNLNKH IVITKNCTVT TV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)