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AT1G45150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.868
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIMZeggNOG:ENOG410YRY7EMBL:AK227318EMBL:BT008320EMBL:CP002684EnsemblPlants:AT1G45150EnsemblPlants:AT1G45150.1
entrez:841083GeneID:841083Gramene:AT1G45150.1hmmpanther:PTHR37193hmmpanther:PTHR37193:SF1HOGENOM:HOG000005660InterPro:IPR025150
KEGG:ath:AT1G45150OMA:HWSKAYFPfam:PF13320PhylomeDB:Q7Y231ProMEX:Q7Y231Proteomes:UP000006548RefSeq:NP_175129.3
TAIR:AT1G45150UniGene:At.38729UniProt:Q7Y231
Coordinates (TAIR10) chr1:-:17077615..17082330
Molecular Weight (calculated) 72373.80 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.32
Length 643 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNNVSQEMT VPVEGVAGGG TAYGFNDAEP LKQSTDPSEV PTADLVNVWC MPNTVNVGSQ ETPRALEPIN LLAARNERES FQIAMRPKVS WAASSPSGIV
101: QVQCSDLCSS AGDRLVVGQS LKLRRVVPVL GVPDALVPLD LPVSQLSLFP GETSVIWVSI DVPTGQPPGQ YEGEIIISAM KTDGGGSSHL AKHEKDQLCV
201: ELNTCLDIME PIEGKPMDEV VERIKCASSS LRRILFSPSF SEFISTNGST DMMEEDVVSN LSLRIKLRLT VWEFIIPVTP SLPAVIGVSD TVIEDRFAVE
301: HGSEDWYKKL DLHFKWLLQY RISPYFCKWG ESMRVLTYTS PWPADHPKSD EYLSDSRLAA YAVPYRQVIA GDDSRESYLR KEVEILRSKP HWNKAYFYLW
401: DEPLNMEHFD NVRKMASEIY AYAPDSRVLT TYYCGPGDAP LAPTPFESFV KVPNLLRPYT QIYCTSEWVL GNREDLVKDI LDELQTENGE EWWTYICLGP
501: SDPHPNWHLG MRGTQQRAVM WRVWKEGGTG FLYWGANCYE KATVPSAEVK FRRGLPPGDG VLYYPGEVFS SSSEPVASLR LERLLSGLQD YEYLKLYESK
601: YGREEAMGLL EKTGVYTGPE RYTLEHRPID VLRGEVYNTC RPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)