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AT1G44980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : pectin methylesterase 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
pectin methylesterase 7 (PME7); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G03930.1); Has 2274 Blast hits to 2269 proteins in 274 species: Archae - 6; Bacteria - 470; Metazoa - 1; Fungi - 61; Plants - 1727; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G44980-MONOMEREC:3.1.1.11eggNOG:COG4677EMBL:AC007915
EMBL:CP002684EnsemblPlants:AT1G44980EnsemblPlants:AT1G44980.1entrez:841063
Gene3D:2.160.20.10GeneID:841063Genevisible:Q9MAL0GO:GO:0005618
GO:GO:0030599GO:GO:0042545GO:GO:0043086GO:GO:0045330
GO:GO:0045490GO:GO:0046910GO:GO:0071944Gramene:AT1G44980.1
gramene_pathway:3.1.1.11gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF60
InParanoid:Q9MAL0InterPro:IPR000070InterPro:IPR011050InterPro:IPR012334
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11KEGG:ath:AT1G44980OMA:MYEENIT
PaxDb:Q9MAL0Pfam:PF01095Pfam:Q9MAL0PhylomeDB:Q9MAL0
PIR:H96508PRIDE:Q9MAL0PRO:PR:Q9MAL0ProteinModelPortal:Q9MAL0
Proteomes:UP000006548RefSeq:NP_175118.2SMR:Q9MAL0SUPFAM:SSF51126
TAIR:AT1G44980tair10-symbols:ATPME7tair10-symbols:PME7UniGene:At.52037
UniPathway:UPA00545UniProt:Q9MAL0
Coordinates (TAIR10) chr1:-:17004256..17005923
Molecular Weight (calculated) 27744.30 Da
IEP (calculated) 5.65
GRAVY (calculated) -0.07
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMIGVMEDS KLHEDMENDM LGDLTSRARE ALALFISISL RDNTELNLVV PNGPSWLSHV DKKDLYLNDE TLKKITDILV AKDVTGNYNI VNVAIAAAPQ
101: HSQKRFVIYI KTSIYVEIVV IGNMKSNLTL IADGQDSTII TFNLSSSNSK RTFNTATFAS NGDGFIRVDM CFRNTTWPVK GPVVTLRVNG DMSIIYRCRV
201: EEYQDALYPH KNRQCYREYF LMDTVDFICG NAAAVFQFCQ IVHMDG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)