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AT1G44810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNA-binding storekeeper protein-related transcriptional regulator
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 1180 Blast hits to 828 proteins in 148 species: Archae - 2; Bacteria - 95; Metazoa - 299; Fungi - 217; Plants - 279; Viruses - 6; Other Eukaryotes - 282 (source: NCBI BLink).
Protein Annotations
EMBL:AC020576EMBL:AY042861EMBL:AY072504EMBL:CP002684EnsemblPlants:AT1G44810EnsemblPlants:AT1G44810.1entrez:841045
GeneID:841045GO:GO:0003677GO:GO:0006355Gramene:AT1G44810.1hmmpanther:PTHR31662hmmpanther:PTHR31662:SF1HOGENOM:HOG000097067
InterPro:IPR007592KEGG:ath:AT1G44810OMA:NWFEKSFPfam:PF04504PhylomeDB:Q9LPF0PIR:B96507Proteomes:UP000006548
RefSeq:NP_564491.1STRING:3702.AT1G44810.1TAIR:AT1G44810UniGene:At.14883UniProt:Q9LPF0
Coordinates (TAIR10) chr1:+:16923621..16924511
Molecular Weight (calculated) 32954.70 Da
IEP (calculated) 5.13
GRAVY (calculated) -0.76
Length 296 amino acids
Sequence (TAIR10)
(BLAST)
001: MNKKLLNPLE DPPTASSSED VDEEISSGED EKEHISNSSS SEEENELKDL STQTLNSPST EAPTLDSGSE TNSDSDKPIV LTSQKKKEGT DSSGTKRASE
101: GTSSKDIKRA KKVSGDDDNK KFQSLWTKED EISLLQGMID FKAETGTSAH DDMNGFFDIA KRYISFDVSK IQFGDKIRGL KKKYFGVRKK KGLDLDHDKK
201: CLGLAKSIWG LDGKEVVVLG GDSETSNWFE KSFLVRVVAR LGVDECIVKW KWSKVSKETK KRIEEKMKMV EAKELELLSQ KIDVLKEVAS VIAETI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)