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AT1G44350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.500
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IAA-leucine resistant (ILR)-like gene 6
Curator
Summary (TAIR10)
encodes a protein similar to IAA amino acid conjugate hydrolase.
Computational
Description (TAIR10)
IAA-leucine resistant (ILR)-like gene 6 (ILL6); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 12322 Blast hits to 12314 proteins in 1908 species: Archae - 129; Bacteria - 9070; Metazoa - 89; Fungi - 234; Plants - 310; Viruses - 0; Other Eukaryotes - 2490 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G44350-MONOMEREC:3.5.1.-eggNOG:COG1473eggNOG:ENOG410ITT5
EMBL:AC084807EMBL:AJ010735EMBL:AY065996EMBL:AY072322
EMBL:AY074380EMBL:AY117292EMBL:CP002684EnsemblPlants:AT1G44350
EnsemblPlants:AT1G44350.1entrez:841026ExpressionAtlas:Q8VYX0Gene3D:3.30.70.360
GeneID:841026Genevisible:Q8VYX0GO:GO:0009694GO:GO:0009753
GO:GO:0010112GO:GO:0016787GO:GO:1990206Gramene:AT1G44350.1
gramene_pathway:3.5.1.-gramene_pathway:PWY-1822gramene_plant_reactome:1119580gramene_plant_reactome:6873774
gramene_plant_reactome:6874739hmmpanther:PTHR11014hmmpanther:PTHR11014:SF62HOGENOM:HOG000241403
InParanoid:Q8VYX0InterPro:IPR002933InterPro:IPR011650InterPro:IPR017439
KEGG:ath:AT1G44350KO:K14664MEROPS:M20.A05OMA:KFEEGYP
PaxDb:Q8VYX0Pfam:PF01546Pfam:Q8VYX0PhylomeDB:Q8VYX0
PIRSF:PIRSF005962PRIDE:Q8VYX0PRO:PR:Q8VYX0ProteinModelPortal:Q0WNN8
ProteinModelPortal:Q8VYX0Proteomes:UP000006548RefSeq:NP_175086.1SMR:Q0WNN8
SMR:Q8VYX0STRING:3702.AT1G44350.1SUPFAM:SSF53187SUPFAM:SSF55031
TAIR:AT1G44350tair10-symbols:ILL6TIGRfam:TIGR01891TIGRFAMs:TIGR01891
TMHMM:TMhelixUniGene:At.28163UniProt:Q0WNN8UniProt:Q8VYX0
Coordinates (TAIR10) chr1:-:16834749..16838201
Molecular Weight (calculated) 50823.00 Da
IEP (calculated) 6.29
GRAVY (calculated) 0.03
Length 464 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP
101: ELAFEEYETS RLIRSELDRM GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH VTMLLGAAHI LKAREHLLKG
201: TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV
301: VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM
401: GAEDFAFYSE IIPAAFYFIG IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)