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AT1G43780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine carboxypeptidase-like 44
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serine carboxypeptidase-like 44 (scpl44); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 3772 Blast hits to 3711 proteins in 431 species: Archae - 0; Bacteria - 430; Metazoa - 636; Fungi - 862; Plants - 1455; Viruses - 0; Other Eukaryotes - 389 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G43780-MONOMEREC:3.4.16.-eggNOG:COG2939eggNOG:KOG1282EMBL:AC006423EMBL:CP002684EnsemblPlants:AT1G43780
EnsemblPlants:AT1G43780.1entrez:840974ESTHER:arath-SCP44Gene3D:3.40.50.1820GeneID:840974Genevisible:Q9MAR8GO:GO:0004185
GO:GO:0005576GO:GO:0051603Gramene:AT1G43780.1hmmpanther:PTHR11802hmmpanther:PTHR11802:SF63HOGENOM:HOG000198295InParanoid:Q9MAR8
InterPro:IPR001563InterPro:IPR018202InterPro:IPR029058KEGG:ath:AT1G43780KO:K16297MEROPS:S10.A25OMA:PEVAFRQ
PANTHER:PTHR11802PaxDb:Q9MAR8Pfam:PF00450Pfam:Q9MAR8PhylomeDB:Q9MAR8PIR:G96501PRIDE:Q9MAR8
PRINTS:PR00724PRO:PR:Q9MAR8PROSITE:PS00131ProteinModelPortal:Q9MAR8Proteomes:UP000006548RefSeq:NP_175046.1scanprosite:PS00131
SMR:Q9MAR8STRING:3702.AT1G43780.1SUPFAM:SSF53474TAIR:AT1G43780tair10-symbols:scpl44UniGene:At.52020UniProt:Q9MAR8
Coordinates (TAIR10) chr1:+:16563811..16567399
Molecular Weight (calculated) 53925.60 Da
IEP (calculated) 6.60
GRAVY (calculated) -0.14
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGGKWRFLE VAVVVMVLQW SCDYNGNLAE GFPVQDLVTK LPGQPEVAFR QFAGYVDIDV KAGRSLFYYF VEAEKQPHSK PLTLWLNGGP GCSSIGGGAF
101: TELGPFYPTG DARGLRRNPK SWNKASNLLF VDSPAGVGWS YSNTTSDYTT GDESTAKDML VFMLRWLEKF PQFKTRNLFL AGESYAGHYV PQLADVILEY
201: NAQRSNRFKF NLKGIAIGNP LLKLDRDVPA IYEFFWSHGM ISDELGLTIM NQCDFEDYTF TDSHNISKLC EAAVNQAGTI ITQYVNYYDI LLDVCYPSLF
301: EQELRLKKMG TRMSFGVDVC MSFEEQLYLN LPEVQKALHA NRTKLPYEWS MCSSLLNYKY TDGNANMLPI LKRIVKSKVP VWVFSGDEDS VIPLLGSRTL
401: VKELADDLNF NTTVPYGAWF DKGQVGGWVV EYGNLLTFAT VRGAAHMVPY SQPSRALHLF TSFVLGRKLP HKSPPALHD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)