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AT1G37130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:29662028 (2018): nucleus nuclear matrix
  • PMID:29662028 (2018): plasma membrane
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : nitrate reductase 2
Curator
Summary (TAIR10)
Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.
Computational
Description (TAIR10)
nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0543eggNOG:COG2041eggNOG:COG5274eggNOG:KOG0534
eggNOG:KOG0535eggNOG:KOG0537EMBL:AK230230EnsemblPlants:AT1G37130
EnsemblPlants:AT1G37130.1entrez:840630ExpressionAtlas:Q0WLH2Gene3D:2.60.40.650
Gene3D:3.10.120.10Gene3D:3.90.420.10GeneID:840630GO:GO:0006809
GO:GO:0020037GO:GO:0030151GO:GO:0042128GO:GO:0043546
GO:GO:0050464Gramene:AT1G37130.1hmmpanther:PTHR19370hmmpanther:PTHR19370:SF100
InParanoid:P11035InterPro:IPR000572InterPro:IPR001199InterPro:IPR001433
InterPro:IPR001709InterPro:IPR001834InterPro:IPR005066InterPro:IPR008333
InterPro:IPR008335InterPro:IPR012137InterPro:IPR014756InterPro:IPR017927
InterPro:IPR017938InterPro:IPR018506InterPro:IPR022407iPTMnet:Q0WLH2
KEGG:ath:AT1G37130KO:K10534OMA:MYWNATSPaxDb:Q0WLH2
Pfam:P11035Pfam:PF00173Pfam:PF00174Pfam:PF00175
Pfam:PF00970Pfam:PF03404Pfscan:PS50255Pfscan:PS51384
PhylomeDB:Q0WLH2PIRSF:PIRSF000233PRIDE:Q0WLH2PRINTS:PR00363
PRINTS:PR00371PRINTS:PR00406PRINTS:PR00407PROSITE:PS00191
PROSITE:PS00559PROSITE:PS50255PROSITE:PS51384ProteinModelPortal:Q0WLH2
RefSeq:NP_174901.1scanprosite:PS00191scanprosite:PS00559SMART:SM01117
SMR:Q0WLH2STRING:3702.AT1G37130.1SUPFAM:SSF52343SUPFAM:SSF55856
SUPFAM:SSF56524SUPFAM:SSF63380SUPFAM:SSF81296TAIR:AT1G37130
tair10-symbols:ATNR2tair10-symbols:B29tair10-symbols:CHL3tair10-symbols:NIA2
tair10-symbols:NIA2-1tair10-symbols:NRtair10-symbols:NR2UniGene:At.23731
UniGene:At.72953UniGene:At.74746UniGene:At.74925UniProt:P11035
UniProt:Q0WLH2
Coordinates (TAIR10) chr1:+:14158617..14161652
Molecular Weight (calculated) 102850.00 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.35
Length 917 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASVDNRQY ARLEPGLNGV VRSYKPPVPG RSDSPKAHQN QTTNQTVFLK PAKVHDDDED VSSEDENETH NSNAVYYKEM IRKSNAELEP SVLDPRDEYT
101: ADSWIERNPS MVRLTGKHPF NSEAPLNRLM HHGFITPVPL HYVRNHGHVP KAQWAEWTVE VTGFVKRPMK FTMDQLVSEF AYREFAATLV CAGNRRKEQN
201: MVKKSKGFNW GSAGVSTSVW RGVPLCDVLR RCGIFSRKGG ALNVCFEGSE DLPGGAGTAG SKYGTSIKKE YAMDPSRDII LAYMQNGEYL TPDHGFPVRI
301: IIPGFIGGRM VKWLKRIIVT TKESDNFYHF KDNRVLPSLV DAELADEEGW WYKPEYIINE LNINSVITTP CHEEILPINA FTTQRPYTLK GYAYSGGGKK
401: VTRVEVTVDG GETWNVCALD HQEKPNKYGK FWCWCFWSLE VEVLDLLSAK EIAVRAWDET LNTQPEKMIW NLMGMMNNCW FRVKTNVCKP HKGEIGIVFE
501: HPTLPGNESG GWMAKERHLE KSADAPPSLK KSVSTPFMNT TAKMYSMSEV KKHNSADSCW IIVHGHIYDC TRFLMDHPGG SDSILINAGT DCTEEFEAIH
601: SDKAKKMLED YRIGELITTG YSSDSSSPNN SVHGSSAVFS LLAPIGEATP VRNLALVNPR AKVPVQLVEK TSISHDVRKF RFALPVEDMV LGLPVGKHIF
701: LCATINDKLC LRAYTPSSTV DVVGYFELVV KIYFGGVHPR FPNGGLMSQY LDSLPIGSTL EIKGPLGHVE YLGKGSFTVH GKPKFADKLA MLAGGTGITP
801: VYQIIQAILK DPEDETEMYV IYANRTEEDI LLREELDGWA EQYPDRLKVW YVVESAKEGW AYSTGFISEA IMREHIPDGL DGSALAMACG PPPMIQFAVQ
901: PNLEKMQYNI KEDFLIF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)