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AT1G37000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.962
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Beta-galactosidase related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); Has 74 Blast hits to 73 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G37000EnsemblPlants:AT1G37000.1entrez:840610
GeneID:840610GO:GO:0016021Gramene:AT1G37000.1KEGG:ath:AT1G37000
OMA:QEDIECYPaxDb:F4I3A5PRIDE:F4I3A5Proteomes:UP000006548
RefSeq:NP_174892.1TAIR:AT1G37000TMHMM:TMhelixUniGene:At.51188
UniProt:F4I3A5
Coordinates (TAIR10) chr1:+:14036038..14037145
Molecular Weight (calculated) 24179.90 Da
IEP (calculated) 8.12
GRAVY (calculated) 0.61
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MARGLPLGPS VASWPMETST AHDIFLLWAM GFAAFAAIGD TIFTTTISVF SGPCLNLYAT TILLNVFNSC PSIIISKNRI MCSQDIYYLH RSDPKPLLYV
101: VKQTPSSYKS IAARTRAAVL LRVVLLKTRS LAMVHLSTLH SLMTVTILSS IDSFMEDPSS NRDLTCVKSP SSICLKALME PLSISTIYLF VALGNVLLVY
201: VLNSESFDLS FLCIWFFLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)