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AT1G35617.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.489
plasma membrane 0.297
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 262 Blast hits to 207 proteins in 54 species: Archae - 0; Bacteria - 28; Metazoa - 70; Fungi - 8; Plants - 93; Viruses - 20; Other Eukaryotes - 43 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G35617EnsemblPlants:AT1G35617.1entrez:840460GeneID:840460Gramene:AT1G35617.1KEGG:ath:AT1G35617
PaxDb:F4HZZ2ProteinModelPortal:F4HZZ2Proteomes:UP000006548RefSeq:NP_174797.1TAIR:AT1G35617UniGene:At.51959UniProt:F4HZZ2
Coordinates (TAIR10) chr1:+:13153583..13153948
Molecular Weight (calculated) 13155.90 Da
IEP (calculated) 4.58
GRAVY (calculated) 0.17
Length 121 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSSHSRRFP MSSVAFLDLR PPPAPPPESS SPPTPPEPPD PPDPQICLSF NVSLAQSPLT TSVPLLLAKS LNSFGVLLLD ESLFTNWFGE MFPHVCLSSS
101: SSTSCNMGRN FMFVECVVLV L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)