AT1G35420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23600.1); Has 2493 Blast hits to 2492 proteins in 784 species: Archae - 17; Bacteria - 1670; Metazoa - 72; Fungi - 315; Plants - 235; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:13026320..13027463 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34169.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.12 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||
| Length | 310 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAASLASLSS LAKAGAPRSL FNRHGSHRLP PPQIIPLASS IKKHITTSFY RRGSSLKNIY ALETSDGAIN VEVDDDEEEE ACELVNGTEV SVDGVEGYLL 101: TAVKNNNGTG LLLLSDVFGF QDSATRDFAY RVACNGYNVL VPDLFRGDPW SKNRPKSEYE EWRRGHDPNR IRQDTTTFTK WMVEEFAAAG ISKKLGVMGF 201: CFGGGRVVDV LATDESGYFS TGVSFYGTRI DSAVAGDVKV PVLFIAGDRD PLCEVKGLYE IEEKIGEGSK VVVYEGRGHG FVHRPETPED DRDAEEAFAL 301: MRNWLHHHLI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)