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AT1G35290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G35250.1); Has 1308 Blast hits to 1307 proteins in 471 species: Archae - 6; Bacteria - 942; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 280 (source: NCBI BLink).
Protein Annotations
EC:3.1.2.-eggNOG:ENOG410IWISeggNOG:ENOG4111REWEMBL:AC069160
EMBL:AF428452EMBL:AY085874EMBL:AY125550EMBL:CP002684
EnsemblPlants:AT1G35290EnsemblPlants:AT1G35290.1entrez:840418Gene3D:3.10.129.10
GeneID:840418GO:GO:0006629GO:GO:0009507GO:GO:0016787
Gramene:AT1G35290.1hmmpanther:PTHR31793hmmpanther:PTHR31793:SF5InterPro:IPR006683
InterPro:IPR029069KEGG:ath:AT1G35290OMA:PLRSGCKPaxDb:Q9C7I5
Pfam:PF03061PhylomeDB:Q9C7I5PIR:H86473Proteomes:UP000006548
RefSeq:NP_564457.1SMR:Q9C7I5SUPFAM:SSF54637TAIR:AT1G35290
UniGene:At.17675UniProt:Q9C7I5
Coordinates (TAIR10) chr1:-:12947760..12948778
Molecular Weight (calculated) 21501.20 Da
IEP (calculated) 9.23
GRAVY (calculated) -0.13
Length 189 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKATGTVAP AMHVVFPCFS SRPLILPLRS TKTFKPLSCF KQQGGKGMNG VHEIELKVRD YELDQFGVVN NAVYANYCQH GQHEFMETIG INCDEVSRSG
101: EALAVSELTI KFLAPLRSGC KFVVKTRISG TSMTRIYFEQ FIFKLPNQEP ILEAKGMAVW LDKRYRPVCI PSYIRSNFGH FQRQHVVEY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)