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AT1G34780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.569
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : APR-like 4
Curator
Summary (TAIR10)
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
Computational
Description (TAIR10)
APR-like 4 (APRL4); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 1005 Blast hits to 976 proteins in 184 species: Archae - 0; Bacteria - 10; Metazoa - 475; Fungi - 115; Plants - 289; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
Protein Annotations
BioGrid:25614eggNOG:ENOG4111M6ZeggNOG:KOG2640EMBL:AC007894EMBL:AY059876EMBL:AY093358EMBL:CP002684
EnsemblPlants:AT1G34780EnsemblPlants:AT1G34780.1entrez:840382Gene3D:3.40.30.10GeneID:840382Genevisible:Q9SA00GO:GO:0003756
GO:GO:0005623GO:GO:0006457GO:GO:0016021GO:GO:0034976GO:GO:0045454hmmpanther:PTHR18929hmmpanther:PTHR18929:SF113
HOGENOM:HOG000239500InterPro:IPR012336InterPro:IPR013766iPTMnet:Q9SA00KEGG:ath:AT1G34780OMA:SLKEPCKPaxDb:Q9SA00
Pfam:PF00085Pfam:Q9SA00Pfscan:PS51352PhylomeDB:Q9SA00PRIDE:Q9SA00PRO:PR:Q9SA00PROSITE:PS51352
ProteinModelPortal:Q9SA00Proteomes:UP000006548RefSeq:NP_001117412.1RefSeq:NP_564452.1SMR:Q9SA00SUPFAM:SSF52833TAIR:AT1G34780
tair10-symbols:APRL4tair10-symbols:ATAPRL4TMHMM:TMhelixUniGene:At.11485UniGene:At.71179UniProt:Q9SA00
Coordinates (TAIR10) chr1:-:12748835..12750124
Molecular Weight (calculated) 35010.40 Da
IEP (calculated) 9.00
GRAVY (calculated) 0.00
Length 310 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKEILLLLL VIMFLTVADV DAVRVPFCAT KSAKDSIFGL RDQTCSVSGV ESDERPRFVA VTEGDERWLQ IALDMIHKNK CDYVALLFYA SWCPFSRSFR
101: PSFDVISSLY SSIPHFAIKE SSIKPSTLSK YGVHGFPTLL LLNSTMRARY RGTRMLDSLV AFYSDVTGIE TLDKTSLERS VSVPHLGNEN NTEPENCPFT
201: WARSPENMLR QETYLALAIV FVLLRLLHLI YPTLVVFMKF TWRRIAQNMR LESLLEHTVG FLSRAVQLCM HRRSNLQGGA MNARAWASKS LATVSIGDSS
301: SSNRRSSSSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)