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AT1G34570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.844
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Essential protein Yae1, N-terminal
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Essential protein Yae1, N-terminal; CONTAINS InterPro DOMAIN/s: Essential protein Yae1, N-terminal (InterPro:IPR019191); BEST Arabidopsis thaliana protein match is: Essential protein Yae1, N-terminal (TAIR:AT3G15750.1); Has 136 Blast hits to 136 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 17; Plants - 55; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111WXFeggNOG:KOG4774EMBL:CP002684EnsemblPlants:AT1G34570EnsemblPlants:AT1G34570.1entrez:840360GeneID:840360
Gramene:AT1G34570.1hmmpanther:PTHR18829hmmpanther:PTHR18829:SF0InParanoid:F4HV08InterPro:IPR019191iPTMnet:F4HV08KEGG:ath:AT1G34570
OMA:LDDPFYGPaxDb:F4HV08Pfam:PF09811PRIDE:F4HV08Proteomes:UP000006548RefSeq:NP_564448.1STRING:3702.AT1G34570.1
TAIR:AT1G34570UniGene:At.20694UniProt:F4HV08
Coordinates (TAIR10) chr1:-:12655297..12656444
Molecular Weight (calculated) 23033.60 Da
IEP (calculated) 4.43
GRAVY (calculated) -0.61
Length 208 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)