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AT1G34440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05095.1); Has 28 Blast hits to 28 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Y65VeggNOG:KOG1075EMBL:AC023913EMBL:CP002684EnsemblPlants:AT1G34440EnsemblPlants:AT1G34440.1entrez:840347
GeneID:840347GO:GO:0016021Gramene:AT1G34440.1KEGG:ath:AT1G34440Proteomes:UP000006548RefSeq:NP_174704.1STRING:3702.AT1G34440.1
TAIR:AT1G34440TMHMM:TMhelixUniGene:At.51932UniProt:Q9C8P1
Coordinates (TAIR10) chr1:-:12591348..12592737
Molecular Weight (calculated) 17750.10 Da
IEP (calculated) 11.28
GRAVY (calculated) 0.19
Length 157 amino acids
Sequence (TAIR10)
(BLAST)
001: MADGKNVVKG LAARNRNITL ILKLIFPASL YFIWRERNQR LHSATSRPTT SIIKEIKMIV RTRLDPLSRA QRSTPPALTL LATWLGFIGF TLCLDLPLAA
101: GAASSCFGPR PCLFLFQRRR KDKVSSRIIY SDQLIFYNVI EAGLAPVTIV DWFCPLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)