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AT1G34260.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.784
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FORMS APLOID AND BINUCLEATE CELLS 1A
Curator
Summary (TAIR10)
Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
Computational
Description (TAIR10)
FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1); Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419; Bacteria - 0; Metazoa - 983; Fungi - 610; Plants - 538; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G34260-MONOMEREC:2.7.1.150eggNOG:COG0459eggNOG:COG5253eggNOG:KOG0230EMBL:AC007454EMBL:CP002684
EnsemblPlants:AT1G34260EnsemblPlants:AT1G34260.1entrez:840326Gene3D:3.30.800.10Gene3D:3.30.810.10Gene3D:3.50.7.10GeneID:840326
Genevisible:Q9XID0GO:GO:0000285GO:GO:0005524Gramene:AT1G34260.1hmmpanther:PTHR11353hmmpanther:PTHR11353:SF107HOGENOM:HOG000241144
InParanoid:Q9XID0InterPro:IPR002423InterPro:IPR002498InterPro:IPR027409InterPro:IPR027483InterPro:IPR027484iPTMnet:Q9XID0
KEGG:ath:AT1G34260KO:K00921OMA:CIFEENIPaxDb:Q9XID0Pfam:PF00118Pfam:PF01504Pfam:Q9XID0
Pfscan:PS51455PhylomeDB:Q9XID0PIR:G86466PRIDE:Q9XID0PRO:PR:Q9XID0PROSITE:PS51455ProteinModelPortal:Q9XID0
Proteomes:UP000006548Reactome:R-ATH-1660514Reactome:R-ATH-1660516Reactome:R-ATH-1660517RefSeq:NP_174686.1SMART:SM00330SMR:Q9XID0
STRING:3702.AT1G34260.1SUPFAM:SSF52029SUPFAM:SSF56104TAIR:AT1G34260tair10-symbols:FAB1DUniGene:At.39777UniProt:Q9XID0
Coordinates (TAIR10) chr1:+:12485967..12491799
Molecular Weight (calculated) 164767.00 Da
IEP (calculated) 5.10
GRAVY (calculated) -0.48
Length 1456 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTPSNSLSSS ERSLSGECSV DGNSCDRGIE DECSSHSSQE DVELTKEVKV DRLERKSKSM PSDILDILDE KSKENSVENV QFLSDREDDS DDVPVWEPPE
0101: PENPEDEVDG VFADDDDDCC DGSKWNKASL LGELSDESSE KRKVYEENRR VMLEEADSKF KFIVSQLIKS AGFSIEESGY WFEIVARLCW EAASMLKPAI
0201: DGKSVDPTEY IKVKCIATGS CVDSEVFKGL VFKKHAALKH MATKYEHPRI MLVEGVLGHP ISGFSSLQSV NQDNEYLLKY VKPVVDIIEA SKPDVMLVEK
0301: SVSRDIQKTI LDKGVTLVFD MKLHRLQRIS RCIGSPILSV DSLSSQKLKH CDSFRIEKIV EEHNAAGESD KKPTKTLMFL EGCPTRLGCT ILLKGCHSER
0401: LKKVKEVVQY SFILAYHLML EASFLADRHT MFSTIFAKEA TSCVVEIENF SPSPSPRESP SEAVDIPVSN GFDEQTIQIN GEADGEKVGT WESDGDHVFS
0501: HEPYNPVIFT GFSSLSARLS KYLGFVQNPE SVPVSVDTDV STTSNLDSIR ESEEDTAEKN EDKQPLLLDP ELPVNSSSDD GDNKSQTEND IESTLESQSI
0601: LVLVSKRNAL RGIMCDQRHF SHIKFYKHFD VPLEKFLRDM FNQRNLCQTC VEFPEAHLYY YAHQNKQLTI QIKRIPVAKG LAGEAKGKIW MWSRCGKCKT
0701: KNASRKSTKR VLISTAARSL SFGKFLELSF SQQTFLNRSS SCGHSFDSDF LHFFGLGSMV AMLSYSQVAS YTVSLPPMKL ESSILIKAGW LEKEFQTVFT
0801: KGISLFEDAA GFLKRLRSQF TNSDLRYQRA RKLLSNIEEL LKHERCIFEE NIKNSFDKAK TIDDVSHRLL RLNRMRWELL LQALIWNYRL QSLVLSDRLL
0901: PSSDETKIYE QGLKTVSEAG MTRYENDNKV SDSGSNGGID TPLVEHKDIP IAGASVGDND QMAESYVPED NESQTLCSSS PDTTSPINNH FDTHLAVNVH
1001: STNGQEADKS IPVTGESLDD EVSTSNGPHI LGWDEWFWLP FEELRSKRIV DIEKEYLLKF EYVNNFTQEN LQTVNQIITE ESSRLRISLR DDDFIVSDYE
1101: DELSSLIACA LAHLNNEESK KPLSRCIHGS LQGFLDNNQD SKQTDRDVSR FSSESTNRLE TLPPPEVLVT FGSVKSVGKP KYSIVSLYAD DFRDLRKRCC
1201: SSELDYIASL SRCKPWDAKG GKSKSVFAKT LDDRFIVKEI KKTEYESFVT FATEYFKYMK DSYDLGNQTC LAKVLGIHQV TVRQPKGGGK EIRHDLMVME
1301: NLSFSRKVTR QYDLKGALHA RFTATSANGE DDVLLDQNFV NDMNKSPLYV SKTSKQNLQR AVYNDTSFLT SINVMDYSLL VGVDDENHEL VCGIIDYLRQ
1401: YTWDKQLETW VKSSLVVPKN VQPTVISPID YKTRFRKFMK THFLCVPDQW CDQGDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)