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AT1G33830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: phloem protein 2-A3 (TAIR:AT2G26820.1); Has 1086 Blast hits to 949 proteins in 74 species: Archae - 0; Bacteria - 24; Metazoa - 755; Fungi - 0; Plants - 247; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J77UeggNOG:ENOG410Y715EMBL:AC022288EMBL:CP002684EnsemblPlants:AT1G33830EnsemblPlants:AT1G33830.1entrez:840278
Gene3D:3.40.50.300GeneID:840278GO:GO:0005525Gramene:AT1G33830.1hmmpanther:PTHR10903hmmpanther:PTHR10903:SF65InterPro:IPR006703
InterPro:IPR027417KEGG:ath:AT1G33830OMA:TENMHRKPfam:PF04548Pfscan:PS51720PhylomeDB:Q9C8U2PIR:A86462
PROSITE:PS51720Proteomes:UP000006548RefSeq:NP_174645.1SMR:Q9C8U2SUPFAM:SSF52540TAIR:AT1G33830UniGene:At.51913
UniProt:Q9C8U2
Coordinates (TAIR10) chr1:-:12279947..12281406
Molecular Weight (calculated) 25670.00 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.37
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEQECPVTN LLLLGRSENG KSSTGNTIIG EKYFEVNLFG RDMDQRCKMF RALIEDGPII NVIDTPGLLE SSVSGDYLSK EIMNCLTMAE EGIHAVLFVL
101: SITNRISQRE EFTFNTLQQI FDDKILDYFI VVFTGGDELE ADNQTLDDYL REGCPEFLTR VLKLCGGRKV LFNNKTKDKG KRNKQLNQLL AHVTDIRQQN
201: GGIPYTENMH RKIKFKNLKY SNVKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)