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AT1G33270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 497 Blast hits to 497 proteins in 121 species: Archae - 0; Bacteria - 10; Metazoa - 345; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XSQSeggNOG:KOG3773EMBL:AK227126EMBL:BT010871EMBL:CP002684EnsemblPlants:AT1G33270
EnsemblPlants:AT1G33270.1entrez:840222ExpressionAtlas:Q6NPP7GeneID:840222GO:GO:0016042GO:GO:0016787Gramene:AT1G33270.1
hmmpanther:PTHR12406hmmpanther:PTHR12406:SF7HOGENOM:HOG000243852InterPro:IPR002641InterPro:IPR016035KEGG:ath:AT1G33270OMA:YHLGAAQ
Pfam:PF01734PhylomeDB:Q6NPP7Proteomes:UP000006548Reactome:R-ATH-1482883RefSeq:NP_174597.2SMR:Q6NPP7STRING:3702.AT1G33270.1
SUPFAM:SSF52151TAIR:AT1G33270UniGene:At.39970UniGene:At.48259UniProt:Q6NPP7
Coordinates (TAIR10) chr1:-:12068324..12070157
Molecular Weight (calculated) 40569.60 Da
IEP (calculated) 5.98
GRAVY (calculated) -0.10
Length 369 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMSLRSTPF ISLRTRKSFN LSPRILALRL SCCSGGSSQN QNFSTDSENK RSFAVATGEL FIGIASRLLK SSNQKTPPID DGDRIASVIE DEIEPAMIWE
101: QRVKDVEAEK ERRVITSPGF SFSAAGLLFP YHLGVAQLLI EKGYIKETTP LAGSSAGAIV CAVITSGATM REALEATKEL AYDCRRNGTA FRLGAVLRES
201: MERLLPDDIH IRSNGRIRVA ITQVFWRPRG LLVDQFDSKS DLIDAVFTSS FIPGYLAPRP ATMFRNRLCV DGGLTLFMPP TAAAKTVRVC AFSASNFKLK
301: GIEICPDCNP LNRATSRQLL NWALEPAEDE VLERLFELGY ADAATWAEMN PVEGLVYDDT PTAQEIPTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)