AT1G33270.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 497 Blast hits to 497 proteins in 121 species: Archae - 0; Bacteria - 10; Metazoa - 345; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:12068324..12070157 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40569.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.98 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||
| Length | 369 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAMSLRSTPF ISLRTRKSFN LSPRILALRL SCCSGGSSQN QNFSTDSENK RSFAVATGEL FIGIASRLLK SSNQKTPPID DGDRIASVIE DEIEPAMIWE 101: QRVKDVEAEK ERRVITSPGF SFSAAGLLFP YHLGVAQLLI EKGYIKETTP LAGSSAGAIV CAVITSGATM REALEATKEL AYDCRRNGTA FRLGAVLRES 201: MERLLPDDIH IRSNGRIRVA ITQVFWRPRG LLVDQFDSKS DLIDAVFTSS FIPGYLAPRP ATMFRNRLCV DGGLTLFMPP TAAAKTVRVC AFSASNFKLK 301: GIEICPDCNP LNRATSRQLL NWALEPAEDE VLERLFELGY ADAATWAEMN PVEGLVYDDT PTAQEIPTS |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)