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AT1G32940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:24665109 (2014): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subtilase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SBT3.5; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT1G32960.1); Has 6590 Blast hits to 6094 proteins in 1001 species: Archae - 208; Bacteria - 3597; Metazoa - 86; Fungi - 174; Plants - 1956; Viruses - 0; Other Eukaryotes - 569 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G32940-MONOMEREC:3.4.21.-eggNOG:COG1404eggNOG:ENOG410IJJ6EMBL:AC006424EMBL:AY074326EMBL:BT006147
EMBL:CP002684EnsemblPlants:AT1G32940EnsemblPlants:AT1G32940.1entrez:840188Gene3D:3.30.70.80Gene3D:3.40.50.200GeneID:840188
Genevisible:Q9MAP7GO:GO:0004252GO:GO:0005576GO:GO:0005618GO:GO:0040008Gramene:AT1G32940.1hmmpanther:PTHR10795
hmmpanther:PTHR10795:SF316HOGENOM:HOG000238262InterPro:IPR000209InterPro:IPR003137InterPro:IPR010259InterPro:IPR015500InterPro:IPR023828
KEGG:ath:AT1G32940MEROPS:S08.A36OMA:WYAGPDIPANTHER:PTHR10795PaxDb:Q9MAP7Pfam:PF00082Pfam:PF02225
Pfam:PF05922Pfam:Q9MAP7PhylomeDB:Q9MAP7PIR:A86454PRIDE:Q9MAP7PRINTS:PR00723PRO:PR:Q9MAP7
PROSITE:PS00138ProteinModelPortal:Q9MAP7Proteomes:UP000006548RefSeq:NP_564412.1scanprosite:PS00138SMR:Q9MAP7STRING:3702.AT1G32940.1
SUPFAM:SSF52743TAIR:AT1G32940tair10-symbols:ATSBT3.5tair10-symbols:SBT3.5TMHMM:TMhelixUniGene:At.11958UniProt:Q9MAP7
Coordinates (TAIR10) chr1:+:11937634..11940856
Molecular Weight (calculated) 82916.80 Da
IEP (calculated) 6.24
GRAVY (calculated) 0.05
Length 774 amino acids
Sequence (TAIR10)
(BLAST)
001: MRNCRVLLVL VLSLVIVLNV VRASDESKVH IVYLGEKQHD DPEFVSESHH QMLSSLLGSK VDAHESMVYS YRHGFSGFAA KLTESQAKKL ADSPEVVHVM
101: ADSFYELATT RTWDYLGLSV ANPNNLLNDT NMGDQVIIGF IDTGVWPESE SFNDNGVGPI PSHWKGGCES GEKFISTNCN RKLIGAKYFI NGFLAENEGF
201: NTTESRDYIS ARDFIGHGTH TASIAGGSFV PNISYKGLAG GNLRGGAPRA RIAIYKACWY VDQLGAVACS SSDILKAMDE SMHDGVDVLS LSLGAQIPLY
301: PETDLRDRIA TGAFHAVAKG IIVVCAGGNS GPAAQTVLNT APWIITVAAT TLDRSFPTPI TLGNRKVILG QALYTGQELG FTSLVYPENA GFTNETFSGV
401: CERLNLNPNR TMAGKVVLCF TTNTLFTAVS RAASYVKAAG GLGVIIARNP GYNLTPCRDD FPCVAIDYEL GTDVLLYIRS TRSPVVKIQP SRTLVGQPVG
501: TKVATFSSRG PNSISPAILK PDIGAPGVSI LAATSPDSNS SVGGFDILAG TSMAAPVVAG VVALLKALHP NWSPAAFRSA IVTTAWRTDP FGEQIFAEGS
601: SRKVADPFDY GGGIVNPEKA ADPGLIYDMG PRDYILYLCS AGYNDSSITQ LVGNVTVCST PKTSVLDVNL PSITIPDLKD EVTLTRTVTN VGTVDSVYKV
701: VVEPPLGIQV VVAPETLVFN SKTKNVSFTV RVSTTHKINT GFYFGNLIWT DSMHNVTIPV SVRTQILQNY YDEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)