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AT1G32900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27177187 (2016): nucleus
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G32900-MONOMERBioGrid:25418BRENDA:2.4.1.242CAZy:GT5DIP:DIP-53368NEC:2.4.1.242eggNOG:COG0297
eggNOG:ENOG410IFA4EMBL:AC006424EMBL:AY088544EMBL:AY094405EMBL:AY123983EMBL:AY149948EMBL:CP002684
EnsemblPlants:AT1G32900EnsemblPlants:AT1G32900.1entrez:840184ExpressionAtlas:Q9MAQ0GeneID:840184Genevisible:Q9MAQ0GO:GO:0004373
GO:GO:0009507GO:GO:0009569GO:GO:0019252GO:GO:0033840Gramene:AT1G32900.1HAMAP:MF_00484hmmpanther:PTHR12526
hmmpanther:PTHR12526:SF383HOGENOM:HOG000294940InParanoid:Q9MAQ0IntAct:Q9MAQ0InterPro:IPR001296InterPro:IPR011835InterPro:IPR013534
KEGG:00500+2.4.1.21KEGG:ath:AT1G32900KO:K13679OMA:HIMAGADPaxDb:Q9MAQ0Pfam:PF00534Pfam:PF08323
Pfam:Q9MAQ0PhylomeDB:Q9MAQ0PIR:F86453PRIDE:Q9MAQ0PRO:PR:Q9MAQ0ProteinModelPortal:Q9MAQ0Proteomes:UP000006548
RefSeq:NP_174566.1SMR:Q9MAQ0STRING:3702.AT1G32900.1SUPFAM:SSF53756TAIR:AT1G32900TIGRfam:TIGR02095TIGRFAMs:TIGR02095
UniGene:At.11953UniPathway:UPA00152unipathway:UPA00164UniProt:Q9MAQ0UniProt:W8PW06
Coordinates (TAIR10) chr1:-:11920582..11923506
Molecular Weight (calculated) 66883.10 Da
IEP (calculated) 8.70
GRAVY (calculated) -0.02
Length 610 amino acids
Sequence (TAIR10)
(BLAST)
001: MATVTASSNF VSRTSLFNNH GASSCSDVAQ ITLKGQSLTH CGLRSFNMVD NLQRRSQAKP VSAKSSKRSS KVKTAGKIVC EKGMSVIFIG AEVGPWSKTG
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)