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AT1G32470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Single hybrid motif superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-928-MONOMERBioGrid:25375eggNOG:COG0509eggNOG:KOG3373EMBL:AC007767EMBL:AF332465EMBL:AF385740
EMBL:AY078028EMBL:CP002684EnsemblPlants:AT1G32470EnsemblPlants:AT1G32470.1entrez:840141GeneID:840141Genevisible:Q9LQL0
GO:GO:0005739GO:GO:0005960GO:GO:0009507GO:GO:0019464Gramene:AT1G32470.1HAMAP:MF_00272hmmpanther:PTHR11715
hmmpanther:PTHR11715:SF1HOGENOM:HOG000239392InParanoid:Q9LQL0InterPro:IPR000089InterPro:IPR002930InterPro:IPR003016InterPro:IPR011053
InterPro:IPR017453iPTMnet:Q9LQL0KEGG:ath:AT1G32470KO:K02437OMA:ATSDINCPANTHER:PTHR11715PaxDb:Q9LQL0
Pfam:PF01597Pfam:Q9LQL0Pfscan:PS50968PhylomeDB:Q9LQL0PIR:A86450PRIDE:Q9LQL0PRO:PR:Q9LQL0
PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:Q9LQL0Proteomes:UP000006548Reactome:R-ATH-389661Reactome:R-ATH-6783984RefSeq:NP_174525.1
scanprosite:PS00189SMR:Q9LQL0STRING:3702.AT1G32470.1SUPFAM:SSF51230TAIR:AT1G32470TIGRfam:TIGR00527TIGRFAMs:TIGR00527
UniGene:At.15531UniGene:At.22333UniGene:At.69604UniProt:Q9LQL0
Coordinates (TAIR10) chr1:-:11739479..11740246
Molecular Weight (calculated) 17898.00 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.18
Length 166 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRMWASST ANALKLSSSA SKSHLLPAFS ISRCFSSVLE GLKYANSHEW VKHEGSVATI GITDHAQDHL GEVVFVELPE ANSSVSKEKS FGAVESVKAT
101: SEILSPISGE VIEVNTKLTE SPGLINSSPY EDGWMIKVKP SSPAELEALM GPKEYTKFCE EEDAAH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)