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AT1G32440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : plastidial pyruvate kinase 3
Curator
Summary (TAIR10)
encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.
Computational
Description (TAIR10)
plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink).
Protein Annotations
EC:2.7.1.40eggNOG:COG0469eggNOG:KOG2323EMBL:AC007767EMBL:AY058121EMBL:BT001147EMBL:CP002684
EnsemblPlants:AT1G32440EnsemblPlants:AT1G32440.1entrez:840138Gene3D:2.40.33.10Gene3D:3.20.20.60Gene3D:3.40.1380.20GeneID:840138
Genevisible:Q93Z53GO:GO:0000287GO:GO:0004743GO:GO:0005524GO:GO:0009507GO:GO:0009570GO:GO:0010431
GO:GO:0016301GO:GO:0030955Gramene:AT1G32440.1hmmpanther:PTHR11817hmmpanther:PTHR11817:SF26HOGENOM:HOG000021559InParanoid:Q93Z53
InterPro:IPR001697InterPro:IPR011037InterPro:IPR015793InterPro:IPR015794InterPro:IPR015795InterPro:IPR015806InterPro:IPR015813
InterPro:IPR018209KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40KEGG:ath:AT1G32440KO:K00873OMA:TKDLVKC
PANTHER:PTHR11817PaxDb:Q93Z53Pfam:PF00224Pfam:PF02887Pfam:Q93Z53PhylomeDB:Q93Z53PIR:F86449
PRIDE:Q93Z53PRINTS:PR01050PRO:PR:Q93Z53PROSITE:PS00110ProteinModelPortal:Q93Z53Proteomes:UP000006548RefSeq:NP_564402.1
SABIO-RK:Q93Z53scanprosite:PS00110SMR:Q93Z53STRING:3702.AT1G32440.1SUPFAM:SSF50800SUPFAM:SSF51621SUPFAM:SSF52935
TAIR:AT1G32440tair10-symbols:PKp3TIGRfam:TIGR01064TIGRFAMs:TIGR01064UniGene:At.66798UniPathway:UPA00109UniProt:Q93Z53
Coordinates (TAIR10) chr1:+:11712205..11714963
Molecular Weight (calculated) 62618.40 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.11
Length 571 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAYGQISSG MTVDPQVLSS SRNIGVSLSP LRRTLIGAGV RSTSISLRQC SLSVRSIKIS EDSRKPKAYA ENGAFDVGVL DSSSYRLADS RTSSNDSRRK
101: TKIVCTIGPS SSSREMIWKL AEAGMNVARL NMSHGDHASH QITIDLVKEY NSLFVDKAIA IMLDTKGPEV RSGDVPQPIF LEEGQEFNFT IKRGVSLKDT
201: VSVNYDDFVN DVEVGDILLV DGGMMSLAVK SKTSDLVKCV VIDGGELQSR RHLNVRGKSA TLPSITDKDW EDIKFGVDNQ VDFYAVSFVK DAKVVHELKN
301: YLKTCSADIS VIVKIESADS IKNLPSIISA CDGAMVARGD LGAELPIEEV PLLQEEIIRR CRSIHKPVIV ATNMLESMIN HPTPTRAEVS DIAIAVREGA
401: DAIMLSGETA HGKFPLKAVN VMHTVALRTE ASLPVRTSAS RTTAYKGHMG QMFAFHASIM ANTLSSPLIV FTRTGSMAVL LSHYRPSATI FAFTNQRRIM
501: QRLALYQGVM PIYMEFSDDA EDTYARSLKL LQDENMLKEG QHVTLVQSGS QPIWREESTH LIQVRKIKIG G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)