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AT1G32350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alternative oxidase 1D
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alternative oxidase 1D (AOX1D); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, response to cyclopentenone; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: stem, sepal, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1297 Blast hits to 1297 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 377; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink).
Protein Annotations
BioGrid:25361EC:1.10.3.11eggNOG:ENOG410IIJ8eggNOG:ENOG410YFEHEMBL:AC007767EMBL:AC084110EMBL:AY072541
EMBL:AY085459EMBL:CP002684EnsemblPlants:AT1G32350EnsemblPlants:AT1G32350.1entrez:840127ExpressionAtlas:Q8LEE7GeneID:840127
Genevisible:Q8LEE7GO:GO:0005743GO:GO:0009916GO:GO:0016021GO:GO:0046872GO:GO:0070469Gramene:AT1G32350.1
gramene_pathway:1.-.-.-gramene_pathway:PWY-4302hmmpanther:PTHR31803hmmpanther:PTHR31803:SF7HOGENOM:HOG000178442InParanoid:Q8LEE7InterPro:IPR002680
KEGG:ath:AT1G32350KO:K17893OMA:YFLAYVIPaxDb:Q8LEE7Pfam:PF01786Pfam:Q8LEE7PhylomeDB:Q8LEE7
PIR:C86448PRIDE:Q8LEE7PRO:PR:Q8LEE7ProteinModelPortal:Q8LEE7Proteomes:UP000006548RefSeq:NP_564395.1SMR:Q8LEE7
STRING:3702.AT1G32350.1TAIR:AT1G32350tair10-symbols:AOX1DTMHMM:TMhelixUniGene:At.40153UniProt:Q08A65UniProt:Q8LEE7
Coordinates (TAIR10) chr1:-:11667237..11668569
Molecular Weight (calculated) 36204.30 Da
IEP (calculated) 8.87
GRAVY (calculated) -0.29
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYRSIYRTL RPVLSSSVQS SGLGIGGFRG HLISHLPNVR LLSSDTSSPV SGNNQPENPI RTADGKVIST YWGIPPTKIT KPDGSAWKWN CFQPWDSYKP
101: DVSIDVTKHH KPSNFTDKFA YWTVQTLKIP VQLFFQRKHM CHAMLLETVA AVPGMVGGML LHLKSLRRFE HSGGWIKALL EEAENERMHL MTFIELSQPK
201: WYERAIVFTV QGVFFNAYFL AYVISPKLAH RITGYLEEEA VNSYTEFLKD IDAGKFENSP APAIAIDYWR LPKDATLRDV VYVIRADEAH HRDINHYASD
301: IQFKGHELKE APAPIGYH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)