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AT1G32210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Defender against death (DAD family) protein
Curator
Summary (TAIR10)
Encodes protein involved in suppression of apoptosis. Complements a mammalian apoptosis suppressor mutation.
Computational
Description (TAIR10)
DEFENDER AGAINST APOPTOTIC DEATH 1 (ATDAD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anti-apoptosis; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT2G35520.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G32210-MONOMERBioGrid:25347EC:2.4.99.18eggNOG:ENOG4111Q2IeggNOG:KOG1746EMBL:AC084165EMBL:BT024553
EMBL:CP002684EMBL:X95585EMBL:Y17608EnsemblPlants:AT1G32210EnsemblPlants:AT1G32210.1entrez:840113GeneID:840113
Genevisible:Q39080GO:GO:0004579GO:GO:0005783GO:GO:0006486GO:GO:0006915GO:GO:0008250GO:GO:0016020
GO:GO:0016021Gramene:AT1G32210.1hmmpanther:PTHR10705HOGENOM:HOG000211854InterPro:IPR003038KEGG:00510+2.4.99.18KEGG:00513+2.4.99.18
KEGG:ath:AT1G32210KO:K12668OMA:VAYMGLVPANTHER:PTHR10705PaxDb:Q39080Pfam:PF02109Pfam:Q39080
PhylomeDB:Q39080PIR:F86446PIR:S71269PIRSF:PIRSF005588PRIDE:Q39080PRO:PR:Q39080Proteomes:UP000006548
RefSeq:NP_174500.1STRING:3702.AT1G32210.1TAIR:AT1G32210tair10-symbols:ATDAD1TMHMM:TMhelixUniGene:At.32UniPathway:UPA00378
UniProt:Q39080
Coordinates (TAIR10) chr1:-:11606047..11607652
Molecular Weight (calculated) 12695.70 Da
IEP (calculated) 8.49
GRAVY (calculated) 0.74
Length 115 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKSTSKDAQ DLFRSLRSAY SATPTNLKII DLYVVFAVFT ALIQVVYMAL VGSFPFNSFL SGVLSCIGTA VLAVCLRIQV NKENKEFKDL APERAFADFV
101: LCNLVLHLVI INFLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)