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AT1G32190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.500
plasma membrane 0.500
ASURE: extracellular,plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G31020.1); Has 9321 Blast hits to 5856 proteins in 779 species: Archae - 6; Bacteria - 1089; Metazoa - 5494; Fungi - 254; Plants - 546; Viruses - 17; Other Eukaryotes - 1915 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1073eggNOG:KOG1552EMBL:AC084165EMBL:BT004050EMBL:BT004991EMBL:CP002684EnsemblPlants:AT1G32190
EnsemblPlants:AT1G32190.1entrez:840111ESTHER:arath-F3C3.3ExpressionAtlas:Q9FVR4Gene3D:3.40.50.1820GeneID:840111GO:GO:0005886
GO:GO:0016787Gramene:AT1G32190.1hmmpanther:PTHR12277hmmpanther:PTHR12277:SF82HOGENOM:HOG000007142InterPro:IPR002925InterPro:IPR029058
MEROPS:S09.A30OMA:MARESYDPfam:PF01738Pfam:PF12695PhylomeDB:Q9FVR4PIR:D86446Proteomes:UP000006548
RefSeq:NP_174498.1SUPFAM:SSF53474TAIR:AT1G32190UniGene:At.16840UniProt:Q9FVR4
Coordinates (TAIR10) chr1:-:11593059..11595731
Molecular Weight (calculated) 46395.10 Da
IEP (calculated) 8.45
GRAVY (calculated) -0.25
Length 422 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)