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AT1G32160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF760)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT1G48450.1); Has 138 Blast hits to 138 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IRSEeggNOG:ENOG410YEIVEMBL:AC084165EMBL:AY037196EMBL:AY087896EMBL:BT002680EMBL:CP002684
EnsemblPlants:AT1G32160EnsemblPlants:AT1G32160.1entrez:840108GeneID:840108GO:GO:0009507GO:GO:0009570Gramene:AT1G32160.1
hmmpanther:PTHR31808hmmpanther:PTHR31808:SF5HOGENOM:HOG000240370InterPro:IPR008479KEGG:ath:AT1G32160OMA:DAFEMIQPfam:PF05542
PhylomeDB:Q9FVR1PIR:A86446Proteomes:UP000006548RefSeq:NP_564389.1STRING:3702.AT1G32160.1TAIR:AT1G32160UniGene:At.24385
UniProt:Q9FVR1
Coordinates (TAIR10) chr1:+:11568701..11570241
Molecular Weight (calculated) 45870.30 Da
IEP (calculated) 5.52
GRAVY (calculated) -0.48
Length 406 amino acids
Sequence (TAIR10)
(BLAST)
001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)