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AT1G32060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phosphoribulokinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G32060-MONOMERBioCyc:MetaCyc:AT1G32060-MONOMERBioGrid:25332EC:2.7.1.19eggNOG:COG0572eggNOG:ENOG410IMEHEMBL:AC074309
EMBL:AY044335EMBL:AY084576EMBL:AY128355EMBL:BT000019EMBL:CP002684EMBL:X58149EnsemblPlants:AT1G32060
EnsemblPlants:AT1G32060.1entrez:840098Gene3D:3.40.50.300GeneID:840098Genevisible:P25697GO:GO:0004849GO:GO:0005524
GO:GO:0005829GO:GO:0006206GO:GO:0006222GO:GO:0008974GO:GO:0009409GO:GO:0009507GO:GO:0009535
GO:GO:0009570GO:GO:0009579GO:GO:0009735GO:GO:0009941GO:GO:0010319GO:GO:0016020GO:GO:0019253
GO:GO:0042742GO:GO:0043097GO:GO:0048046Gramene:AT1G32060.1gramene_plant_reactome:1119519gramene_plant_reactome:6877242hmmpanther:PTHR10285
hmmpanther:PTHR10285:SF74HOGENOM:HOG000230117InParanoid:P25697IntAct:P25697InterPro:IPR006082InterPro:IPR006083InterPro:IPR027417
KEGG:00710+2.7.1.19KEGG:ath:AT1G32060KO:K00855ncoils:CoilOMA:EVKIAWKPaxDb:P25697Pfam:P25697
Pfam:PF00485PhylomeDB:P25697PIR:S16583PRIDE:P25697PRINTS:PR00478PRO:PR:P25697PROSITE:PS00567
ProteinModelPortal:P25697Proteomes:UP000006548RefSeq:NP_174486.1scanprosite:PS00567SMR:P25697STRING:3702.AT1G32060.1SUPFAM:SSF52540
SWISS-2DPAGE:P25697TAIR:AT1G32060tair10-symbols:PRKUniGene:At.22659UniPathway:UPA00116UniProt:P25697World-2DPAGE:0003:P25697
Coordinates (TAIR10) chr1:+:11532668..11534406
Molecular Weight (calculated) 44466.00 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.31
Length 395 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)