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AT1G32000.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC074309EMBL:CP002684EnsemblPlants:AT1G32000EnsemblPlants:AT1G32000.1entrez:840091GeneID:840091Gramene:AT1G32000.1
InterPro:IPR021704KEGG:ath:AT1G32000ncoils:CoilOMA:WERFELDPfam:PF11690PIR:B86444Proteomes:UP000006548
RefSeq:NP_174480.1TAIR:AT1G32000UniGene:At.51867UniProt:Q9C6W7
Coordinates (TAIR10) chr1:-:11508285..11508909
Molecular Weight (calculated) 20743.70 Da
IEP (calculated) 10.30
GRAVY (calculated) -0.79
Length 181 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGSQVSRGT SSDSDDEPDS SSTSNRGYFG CPRRDRSPSP IRVVEDRVIR RPALPVGEPL YPWRRPPVIA ASPSFTPVGR DFVPGSVKYP ADLLRHLHPE
101: EAARFRYWFR TLEGQLRAYC RRHAKLLRMM QEMELGMRRL EADPKDWERF GLGKLNPLPP FLRAYCRAKL REDEASSSRG P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)