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AT1G31940.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.933
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY8SeggNOG:ENOG410Y8EKEMBL:AY069896EMBL:AY086420
EMBL:AY094031EMBL:CP002684EnsemblPlants:AT1G31940EnsemblPlants:AT1G31940.1
entrez:840084GeneID:840084GO:GO:0005886Gramene:AT1G31940.1
hmmpanther:PTHR34196HOGENOM:HOG000239386KEGG:ath:AT1G31940OMA:PVEPLDN
PhylomeDB:Q8VYV3Proteomes:UP000006548RefSeq:NP_564386.1TAIR:AT1G31940
UniGene:At.28437UniProt:Q8VYV3
Coordinates (TAIR10) chr1:-:11470293..11471154
Molecular Weight (calculated) 17122.20 Da
IEP (calculated) 5.65
GRAVY (calculated) -0.52
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGIFSRFSV GRSTHRRTQS AIDDKEVLAP NSDVIAATTT TATTATHGIE VATEFKPVEH PVEPLDNDLP IQCPLPEPSI LNDGRIWKER VSASMRRKGD
101: LQIVKDEAAS ESDGSAPKPP RPPQPNRSIL PSLSAPEHNL LNLLEECNAM PPVTSKNG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)