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AT1G31850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G19120.2); Has 1070 Blast hits to 1059 proteins in 86 species: Archae - 5; Bacteria - 108; Metazoa - 0; Fungi - 3; Plants - 946; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
EC:2.1.1.-eggNOG:ENOG410IKH9eggNOG:ENOG4111CGIEMBL:AC079041EMBL:AF083759EMBL:AK319005EMBL:AY128291
EMBL:BT000825EMBL:CP002684EnsemblPlants:AT1G31850EnsemblPlants:AT1G31850.1EnsemblPlants:AT1G31850.2EnsemblPlants:AT1G31850.3entrez:840075
Gene3D:3.40.50.150GeneID:840075Genevisible:Q9C6S7GO:GO:0000139GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0008168GO:GO:0016021Gramene:AT1G31850.1Gramene:AT1G31850.2Gramene:AT1G31850.3hmmpanther:PTHR10108hmmpanther:PTHR10108:SF907
HOGENOM:HOG000238541InParanoid:Q9C6S7InterPro:IPR004159InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-
KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-KEGG:ath:AT1G31850OMA:KNECLIPPaxDb:Q9C6S7Pfam:PF03141Pfam:Q9C6S7PhylomeDB:Q9C6S7
PIR:F86442PRIDE:Q9C6S7PRO:PR:Q9C6S7ProteinModelPortal:Q9C6S7Proteomes:UP000006548RefSeq:NP_174468.1RefSeq:NP_849736.1
RefSeq:NP_973949.1STRING:3702.AT1G31850.1SUPFAM:SSF53335TAIR:AT1G31850TMHMM:TMhelixUniGene:At.22312UniProt:Q9C6S7
Coordinates (TAIR10) chr1:+:11431165..11433443
Molecular Weight (calculated) 68800.60 Da
IEP (calculated) 8.93
GRAVY (calculated) -0.44
Length 603 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSGKQSSQP EKGTSRILSL TVLFIAFCGF SFYLGGIFCS ERDKIVAKDV TRTTTKAVAS PKEPTATPIQ IKSVSFPECG SEFQDYTPCT DPKRWKKYGV
101: HRLSFLERHC PPVYEKNECL IPPPDGYKPP IRWPKSREQC WYRNVPYDWI NKQKSNQHWL KKEGDKFHFP GGGTMFPRGV SHYVDLMQDL IPEMKDGTVR
201: TAIDTGCGVA SWGGDLLDRG ILSLSLAPRD NHEAQVQFAL ERGIPAILGI ISTQRLPFPS NAFDMAHCSR CLIPWTEFGG IYLLEIHRIV RPGGFWVLSG
301: PPVNYNRRWR GWNTTMEDQK SDYNKLQSLL TSMCFKKYAQ KDDIAVWQKL SDKSCYDKIA KNMEAYPPKC DDSIEPDSAW YTPLRPCVVA PTPKVKKSGL
401: GSIPKWPERL HVAPERIGDV HGGSANSLKH DDGKWKNRVK HYKKVLPALG TDKIRNVMDM NTVYGGFSAA LIEDPIWVMN VVSSYSANSL PVVFDRGLIG
501: TYHDWCEAFS TYPRTYDLLH LDSLFTLESH RCEMKYILLE MDRILRPSGY VIIRESSYFM DAITTLAKGI RWSCRREETE YAVKSEKILV CQKKLWFSSN
601: QTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)