AT1G31530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.840 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNAse I-like superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31500.1); Has 994 Blast hits to 990 proteins in 191 species: Archae - 0; Bacteria - 2; Metazoa - 479; Fungi - 209; Plants - 187; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11281188..11282468 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32086.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.58 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||
| Length | 283 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSSLMYVS PPESILWEKR SKAILDNIKN FEADFICLQE VDEYHSFFDR NMEAQGYSGI PIENKEGYEC AIFFKPKFAE FITYQTTRIQ GYTKYENLCV 101: APSSSTVSSE SSDVVNAEEL SVVMVAFKIL KPFNHVVIIA SSHLKSGKPD RWDDLKLAQV KTLMTELASF KEIISALTNC SPSVILAGDF NSKPYVHKYI 201: NSDNIPSDID LRSVYEFTKG EPRFTNNVPG FAETLDYMFY THSEIISPVK LLDSPDEVDF LPNEIHPSDH LPIGVEFEIN RNI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)