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AT1G31290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARGONAUTE 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARGONAUTE 3 (AGO3); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT1G31280.1); Has 87664 Blast hits to 32385 proteins in 1910 species: Archae - 110; Bacteria - 26465; Metazoa - 27622; Fungi - 6311; Plants - 10699; Viruses - 1201; Other Eukaryotes - 15256 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XP07eggNOG:KOG1041EMBL:AC007654EMBL:CP002684EnsemblPlants:AT1G31290EnsemblPlants:AT1G31290.1entrez:840017
Gene3D:3.30.420.10GeneID:840017Genevisible:Q9SHF2GO:GO:0003723GO:GO:0006351GO:GO:0006355GO:GO:0006417
GO:GO:0006952GO:GO:0030529GO:GO:0031047Gramene:AT1G31290.1hmmpanther:PTHR22891hmmpanther:PTHR22891:SF4HOGENOM:HOG000116043
InParanoid:Q9SHF2InterPro:IPR003100InterPro:IPR003165InterPro:IPR012337InterPro:IPR014811InterPro:IPR032472InterPro:IPR032474
iPTMnet:Q9SHF2KEGG:ath:AT1G31290KO:K11593OMA:NMTTVEGPaxDb:Q9SHF2Pfam:PF02170Pfam:PF02171
Pfam:PF08699Pfam:PF16486Pfam:PF16488Pfam:Q9SHF2Pfscan:PS50821Pfscan:PS50822PhylomeDB:Q9SHF2
PRIDE:Q9SHF2PRO:PR:Q9SHF2PROSITE:PS50821PROSITE:PS50822ProteinModelPortal:Q9SHF2Proteomes:UP000006548Reactome:R-ATH-426486
Reactome:R-ATH-426496Reactome:R-ATH-5578749RefSeq:NP_174414.1SMART:SM00949SMART:SM00950SMART:SM01163SMR:Q9SHF2
STRING:3702.AT1G31290.1SUPFAM:SSF101690SUPFAM:SSF53098TAIR:AT1G31290tair10-symbols:AGO3UniGene:At.51183UniProt:Q9SHF2
Coordinates (TAIR10) chr1:+:11188293..11192317
Molecular Weight (calculated) 129192.00 Da
IEP (calculated) 9.78
GRAVY (calculated) -0.50
Length 1194 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG DGRGRGGDGD RGYSGRGDGH GRGGGGDRGR GYSGRGDGRG RGGGGDRGRG YSGRGDGHGR GGGGDRGRGY
0101: SGRGRGFVQD RDGGWVNPGQ SSGGHVRGRG TQLQQPPPQE VPPSSSQAQV SQGVAPGDVG QGGVGDVGRD GVGDVGRDGV GDVGQGGVGD VGQVGVGDVG
0201: QGGVGDVGQG GVGDVGRDGV GDVGRDGVGD VGRGGVGDRG QSQSGLSSGH FGRGTQLQQP QPQAVSQSSS QGQVSQSFAT GGVGLGAWAR KPQLFSDSTV
0301: LPSSSSSNVV ASHTASGSQV MTPKPSSSDK KEPVKRPDKG GNIKVKGVIN LSVNHFRVSF STESVIRHYD VDIKGENSSK KISRFELAMV KEKLFKDNND
0401: FPNAMTAYDG QKNIFSAVEL PTGSFKVDFS ETEEIMRGRS YTFIIKQVKE LKLLDLQAYI DGRSTFIPRD VLQGMDVVMK EHPSKRMITV GKRFFSTRLE
0501: IDFGYGVGAA KGFHHTLKPT VQGLSLCLNS SLLAFRKAIS VIEYLKLYFG WRNIRQFKNC RPDDVVQELI GLKVTVDHRK TKQKFIIMGL SKDDTKDIKF
0601: DFIDHAGNQP PRKISIVEYF KEKYGRDIDH KDIPCLNLGK KGRENFVPME FCNLVEGQIF PKEKLYRDSA AWLKELSLVT PQQRLENINK MIKSSDGPRG
0701: GDIIGNFGLR VDPNMTTVEG RVLEAPTLKL TDRRGNPIHE KLMSESNQWN LTTKGVTKGS IIKHWAVLDF TASESLKKKM PGYFVNKLIE RCKGLGMQME
0801: APIVCKTSSM ETLYDGNALE ELLRSVIDEA SHNHGGACPT LVLCAMTGKH DGYKTLKWIA ETKLGLVTQC FLTISAIKGE TVSDQYLANL ALKINAKVGG
0901: TNVELVDNIF SFFKKEDKVM FIGADVNHPA AHDNMSPSIV AVVGTLNWPE ANRYAARVKA QSHRKEEIQG FGETCWELIE AHSQAPEKRP NKIVIFRDGV
1001: SDGQFDMVLN VELQNVKDVF AKVGYNPQIT VIVAQKRHQT RFFPATTSKD GRAKGNVPSG TVVDTTIIHP FEYDFYLCSQ HGAIGTSKPT HYYVLSDEIG
1101: FNSNQIQKLI FDLCFTFTRC TKPVALVPPV SYADKAASRG RVYYEASLMK KNSKQSRGAS SSSASVASSS SSVTMEDKEI FKVHAGIENF MFFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)