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AT1G30870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G49570.1); Has 4658 Blast hits to 4636 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 376; Plants - 4203; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G30870-MONOMEREC:1.11.1.7eggNOG:ENOG410IIIReggNOG:ENOG410YG59EMBL:AC000107EMBL:AC004135EMBL:BT002890
EMBL:CP002684EnsemblPlants:AT1G30870EnsemblPlants:AT1G30870.1entrez:839971GeneID:839971Genevisible:Q9SY33GO:GO:0004601
GO:GO:0005576GO:GO:0006979GO:GO:0020037GO:GO:0042744GO:GO:0046872Gramene:AT1G30870.1hmmpanther:PTHR31235
hmmpanther:PTHR31235:SF8HOGENOM:HOG000237557InParanoid:Q9SY33InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793
InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT1G30870KO:K00430OMA:PMGRESVPaxDb:Q9SY33PeroxiBase:83
Pfam:PF00141Pfam:Q9SY33Pfscan:PS50873PhylomeDB:Q9SY33PRIDE:Q9SY33PRINTS:PR00458PRINTS:PR00461
PRO:PR:Q9SY33PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q9SY33Proteomes:UP000006548RefSeq:NP_174372.1
scanprosite:PS00435scanprosite:PS00436SMR:Q9SY33STRING:3702.AT1G30870.1SUPFAM:SSF48113TAIR:AT1G30870TMHMM:TMhelix
UniGene:At.27629UniProt:Q9SY33
Coordinates (TAIR10) chr1:+:10991535..10992885
Molecular Weight (calculated) 38341.50 Da
IEP (calculated) 6.89
GRAVY (calculated) -0.24
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLAVVSVVV ILGVLVAWPV SAGRKDLPGA GGYGGDDDDD TKSLFPLDNL LSLNYYDRIC PDFEKIVVTK VREWTKSDSS LGPALLRLIF HDCGVTGCDA
101: SVLLDYEGTE RRSPASKTLR GFELIDDIKS EMEKSCPGKV SCADILTSAS RAATVQLGGP YWPNVYGRRD SKHSYARDVE KVPSGRRDVT ALLETFQSYG
201: LNVLDLVVLS GAHTIGKASC GTIQSRLYNY NATSGSDPSI DAKYADYLQR RCRWASETVD LDPVTPAVFD NQYYINLQKH MGVLSTDQEL VKDPRTAPLV
301: KTFAEQSPQI FRQQFAVSMA KLVNVGVLTG EDRVGEIRKV CSKSNSRAY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)