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AT1G30750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, pollen tube; Has 1177 Blast hits to 607 proteins in 189 species: Archae - 0; Bacteria - 312; Metazoa - 195; Fungi - 185; Plants - 27; Viruses - 16; Other Eukaryotes - 442 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JT7XeggNOG:ENOG410XUVQEMBL:AY050922EMBL:AY113970
EMBL:CP002684EnsemblPlants:AT1G30750EnsemblPlants:AT1G30750.1entrez:839955
GeneID:839955Gramene:AT1G30750.1HOGENOM:HOG000151168InterPro:IPR013182
KEGG:ath:AT1G30750OMA:NQPSSTGPfam:PF08226PhylomeDB:Q949S2
Proteomes:UP000006548RefSeq:NP_564361.1STRING:3702.AT1G30750.1TAIR:AT1G30750
UniGene:At.26544UniProt:Q949S2
Coordinates (TAIR10) chr1:-:10905050..10905688
Molecular Weight (calculated) 22214.40 Da
IEP (calculated) 10.67
GRAVY (calculated) -0.21
Length 212 amino acids
Sequence (TAIR10)
(BLAST)
001: MDMKFAKTGR CMLTIIFCLL VSSISEAAQV TKITTPLEPT GGVSVNQNQP ILGQPSSSSP VNQPLTGLSQ PLIGFNQPSS TGLKQPILGQ PSTSSSVNQP
101: LTGINQPLTG FNQPSSTGLN NPILGQPSTS SSLNQPLTGF NQPSSTGFNQ PISSSSSSSS SAQNQPFTNR LNQNNLSGVP FLNGNSKLKV SGTKIIFIWI
201: GLFLALHGTD RN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)