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AT1G30550.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.957
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G45231.2); Has 1500 Blast hits to 1060 proteins in 507 species: Archae - 106; Bacteria - 580; Metazoa - 259; Fungi - 264; Plants - 97; Viruses - 3; Other Eukaryotes - 191 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRUDeggNOG:KOG2730EMBL:AC009917EMBL:CP002684
EnsemblPlants:AT1G30550EnsemblPlants:AT1G30550.1entrez:839935ExpressionAtlas:Q9S9P4
Gene3D:3.40.50.150GeneID:839935GO:GO:0001510GO:GO:0008168
GO:GO:0009452Gramene:AT1G30550.1hmmpanther:PTHR14741hmmpanther:PTHR14741:SF32
HOGENOM:HOG000204302InterPro:IPR019012InterPro:IPR029063KEGG:00253+2.1.1.-
KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-
KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-
KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-
KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Pfam:PF09445PIR:F86430Proteomes:UP000006548
RefSeq:NP_174343.3SMR:Q9S9P4STRING:3702.AT1G30550.1SUPFAM:SSF53335
TAIR:AT1G30550UniGene:At.40531UniProt:Q9S9P4
Coordinates (TAIR10) chr1:-:10820838..10823641
Molecular Weight (calculated) 51511.20 Da
IEP (calculated) 5.88
GRAVY (calculated) -0.21
Length 455 amino acids
Sequence (TAIR10)
(BLAST) 		001: MKKEAESLIE KEHGTNPKIS RYWIQRYDLF SKYDQGIEMD EEGWYSVTPE EIAIKQAERC RGKVVIDCFS GVGAIDIDPM KIALAMNNAK VYGVANRIDF
101: VTGDFMQLAP SLKGDVLFLS PPWGGPTYSK VESYKLDMLL PRDGYSLFQT ALSITPNIIM FLPKNIDLAQ LEELACLSSP PLTLELIPRI SISRRIESNP
201: ALSSRTIRGV ERVDSLTHES HNMTRSMKLK KRSRLKKEVK STIEKDNGRR HKITKYWIQR YDLFSRYDQG IEMDEEGWYS VTPEEIAIKQ AQRYRGKVVI
301: DCFSGVGGNT IQFAKVCSSV VAIDIDPVKV ELAMNNAMVY GVANRVDFVI GDFIQLAPSL KGDVVFLSPP WGGPMYRDFE SYNLDMLQPR DGYSLFQIAQ
401: SITPNIIMFL PRNVDLAQVE ELAWLSSPPL NLEIEENFVG GRMKAVTAYF SCNAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)