AT1G30530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.474 golgi 0.422 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-glucosyl transferase 78D1 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-glucosyl transferase 78D1 (UGT78D1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D2 (TAIR:AT5G17050.1); Has 7371 Blast hits to 7330 proteins in 440 species: Archae - 0; Bacteria - 437; Metazoa - 1880; Fungi - 26; Plants - 4903; Viruses - 71; Other Eukaryotes - 54 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10814917..10816374 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50097.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.36 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||||||
| Length | 453 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS 101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK 201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK 301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE 401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)