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AT1G30400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15133126 (2004): plant-type vacuole
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:25402197 (2015): plastid plastid thylakoid plastid thylakoid membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): plant-type vacuole
  • PMID:21433285 (2011): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:14760709 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : multidrug resistance-associated protein 1
Curator
Summary (TAIR10)
glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.
Computational
Description (TAIR10)
multidrug resistance-associated protein 1 (MRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 677063 Blast hits to 355607 proteins in 3971 species: Archae - 12123; Bacteria - 549360; Metazoa - 12555; Fungi - 7909; Plants - 6149; Viruses - 21; Other Eukaryotes - 88946 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G30400-MONOMERBioCyc:ARA:GQT-112-MONOMERBioGrid:25155EC:3.6.3.44eggNOG:COG1132eggNOG:KOG0054EMBL:AC025295
EMBL:AF008124EMBL:AF008125EMBL:AY090258EMBL:CP002684EMBL:U96398EnsemblPlants:AT1G30400EnsemblPlants:AT1G30400.1
EnsemblPlants:AT1G30400.2entrez:839920Gene3D:3.40.50.300GeneID:839920Genevisible:Q9C8G9GO:GO:0000325GO:GO:0005524
GO:GO:0005773GO:GO:0005774GO:GO:0008559GO:GO:0009506GO:GO:0015446GO:GO:0015700GO:GO:0016021
GO:GO:0042626GO:GO:0046685GO:GO:0071992GO:GO:0071994GO:GO:0098655GO:GO:0098656GO:GO:1902417
GO:GO:1902418Gramene:AT1G30400.1Gramene:AT1G30400.2hmmpanther:PTHR24223hmmpanther:PTHR24223:SF251InParanoid:Q9C8G9IntAct:Q9C8G9
InterPro:IPR003439InterPro:IPR003593InterPro:IPR011527InterPro:IPR017871InterPro:IPR027417KEGG:ath:AT1G30400ncoils:Coil
OMA:QNTSREIPaxDb:Q9C8G9Pfam:PF00005Pfam:PF00664Pfam:Q9C8G9Pfscan:PS50893Pfscan:PS50929
PhylomeDB:Q9C8G9PIR:D86428PRIDE:Q9C8G9PRO:PR:Q9C8G9PROSITE:PS00211PROSITE:PS50893PROSITE:PS50929
ProteinModelPortal:Q9C8G9Proteomes:UP000006548Reactome:R-ATH-2142850Reactome:R-ATH-382556RefSeq:NP_001031116.1RefSeq:NP_174329.1scanprosite:PS00211
SMART:SM00382SMR:Q9C8G9STRING:3702.AT1G30400.1SUPFAM:SSF52540SUPFAM:SSF90123TAIR:AT1G30400tair10-symbols:ABCC1
tair10-symbols:ATABCC1tair10-symbols:ATMRP1tair10-symbols:EST1tair10-symbols:MRP1TCDB:3.A.1.208.20TMHMM:TMhelixUniGene:At.21491
UniProt:Q9C8G9
Coordinates (TAIR10) chr1:+:10728139..10737697
Molecular Weight (calculated) 181937.00 Da
IEP (calculated) 6.08
GRAVY (calculated) 0.03
Length 1622 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGFEPLDWYC KPVPNGVWTK TVDYAFGAYT PCAIDSFVLG ISHLVLLILC LYRLWLITKD HKVDKFCLRS KWFSYFLALL AAYATAEPLF RLVMRISVLD
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVV ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYLYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPVGTEN SEDYEYEELP GGENICPERH ANLFDSIFFS WLNPLMTLGS KRPLTEKDVW HLDTWDKTET LMRSFQKSWD KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV VLGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASIIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQM VNANVSLNRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGY FSWDSKADRP TLSNINLDIP LGSLVAVVGS TGEGKTSLIS AMLGELPARS DATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GAPFDQEKYE RVIDVTALQH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGQT TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELCHSGP LFQRLMENAG KVEDYSEENG EAEVDQTSVK PVENGNANNL QKDGIETKNS KEGNSVLVKR EERETGVVSW
0901: KVLERYQNAL GGAWVVMMLV ICYVLTQVFR VSSSTWLSEW TDSGTPKTHG PLFYNIVYAL LSFGQVSVTL INSYWLIMSS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDMG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVVFYGAYL YYQNTSREIK RMDSTTRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGRS MDNNIRFTLV NMAANRWLGI RLEVLGGLMV WLTASLAVMQ NGKAANQQAY ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIEIPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFL ISPMDKVGIV GRTGAGKSSL LNALFRIVEL EKGRILIDEC
1301: DIGRFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFSEHND ADLWESLERA HLKDTIRRNP LGLDAEVTEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSSPENLLS NGESSFSKMV QSTGTANAEY LRSITLENKR TREANGDDSQ
1501: PLEGQRKWQA SSRWAAAAQF ALAVSLTSSH NDLQSLEIED DNSILKKTKD AVVTLRSVLE GKHDKEIEDS LNQSDISRER WWPSLYKMVE GLAVMSRLAR
1601: NRMQHPDYNL EGKSFDWDNV EM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)