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AT1G30380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25641898 (2015): plasma membrane
  • PMID:25402197 (2015): plastid plastid thylakoid plastid thylakoid membrane
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:23851315 (2013): plastid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18633119 (2008): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:15322131 (2004): plastid
  • PMID:14729914 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : photosystem I subunit K
Curator
Summary (TAIR10)
Encodes subunit K of photosystem I reaction center.
Computational
Description (TAIR10)
photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-1091BioGrid:25153eggNOG:ENOG410IZCAeggNOG:ENOG4111RY5EMBL:AC025295EMBL:AJ245866EMBL:AY039848
EMBL:AY074826EMBL:CP002684EnsemblPlants:AT1G30380EnsemblPlants:AT1G30380.1entrez:839918Gene3D:1.10.286.40GeneID:839918
Genevisible:Q9SUI5GO:GO:0009507GO:GO:0009522GO:GO:0009534GO:GO:0009535GO:GO:0009579GO:GO:0015979
GO:GO:0016021GO:GO:0016168Gramene:AT1G30380.1hmmpanther:PTHR34195hmmpanther:PTHR34195:SF2HOGENOM:HOG000242129InParanoid:Q9SUI5
InterPro:IPR000549InterPro:IPR016370InterPro:IPR017493InterPro:IPR023618KEGG:ath:AT1G30380KO:K02698OMA:NTGALDQ
PaxDb:Q9SUI5Pfam:PF01241Pfam:Q9SUI5PhylomeDB:Q9SUI5PIR:B86428PIRSF:PIRSF002912PRIDE:Q9SUI5
PRO:PR:Q9SUI5PROSITE:PS01026ProteinModelPortal:Q9SUI5Proteomes:UP000006548RefSeq:NP_174327.1scanprosite:PS01026SMR:Q9SUI5
STRING:3702.AT1G30380.1SUPFAM:0039459SUPFAM:SSF81563TAIR:AT1G30380tair10-symbols:PSAKTCDB:5.B.4.1.1TIGRfam:TIGR03050
TIGRFAMs:TIGR03050TMHMM:TMhelixUniGene:At.24377UniGene:At.24759UniGene:At.67254UniProt:Q9SUI5
Coordinates (TAIR10) chr1:+:10722325..10723013
Molecular Weight (calculated) 13207.30 Da
IEP (calculated) 11.23
GRAVY (calculated) 0.35
Length 130 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTMMTTLP QFNGLRATKI SAAPVQGLAS VQPMRRKGNG ALGAKCDFIG SSTNLIMVTS TTLMLFAGRF GLAPSANRKA TAGLRLEARD SGLQTGDPAG
101: FTLADTLACG TVGHIIGVGV VLGLKNIGAI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)