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AT1G29510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SMALL AUXIN UPREGULATED 68 (SAUR68); CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 748 Blast hits to 732 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JDNNeggNOG:ENOG410YP87EMBL:AC068667EMBL:AK118573
EMBL:AY088721EMBL:BT003660EMBL:CP002684EnsemblPlants:AT1G29510
EnsemblPlants:AT1G29510.1entrez:839828GeneID:839828Genevisible:F4I1I4
GO:GO:0005886GO:GO:0007275GO:GO:0009734GO:GO:0009926
GO:GO:0046620Gramene:AT1G29510.1hmmpanther:PTHR31175hmmpanther:PTHR31175:SF1
InParanoid:F4I1I4InterPro:IPR003676KEGG:ath:AT1G29510OMA:GSHADSC
PaxDb:F4I1I4Pfam:F4I1I4Pfam:PF02519PIR:A86418
PRO:PR:F4I1I4Proteomes:UP000006548RefSeq:NP_564332.1STRING:3702.AT1G29510.1
TAIR:AT1G29510tair10-symbols:SAUR68UniGene:At.40731UniProt:F4I1I4
Coordinates (TAIR10) chr1:+:10322683..10323114
Molecular Weight (calculated) 16347.10 Da
IEP (calculated) 9.82
GRAVY (calculated) -0.06
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MMINAKKLMK MAKKWQQRAA LHRKRISFQR SNVFTSSSST VEKGCFVVYT ADKIRFAFPI SYLSNSIVQE LLKISEEEFG LPTEGPITLP FDSVFLEYLI
101: KLIQRRMDGD TEKALLMSIS SAKCSLQCSL LQQEQSTQQL LVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)