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AT1G29110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.835
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT1G29080.1); Has 7435 Blast hits to 7380 proteins in 647 species: Archae - 33; Bacteria - 74; Metazoa - 3227; Fungi - 2; Plants - 1844; Viruses - 137; Other Eukaryotes - 2118 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4870eggNOG:KOG1543EMBL:CP002684EnsemblPlants:AT1G29110EnsemblPlants:AT1G29110.1entrez:839786GeneID:839786
GO:GO:0008234Gramene:AT1G29110.1hmmpanther:PTHR12411hmmpanther:PTHR12411:SF333InParanoid:F4HZW2InterPro:IPR000668InterPro:IPR013128
InterPro:IPR013201InterPro:IPR025660InterPro:IPR025661KEGG:ath:AT1G29110MEROPS:I29.003OMA:SCRANARPANTHER:PTHR12411
PaxDb:F4HZW2Pfam:PF00112Pfam:PF08246PRIDE:F4HZW2PROSITE:PS00639PROSITE:PS00640ProteinModelPortal:F4HZW2
Proteomes:UP000006548RefSeq:NP_564322.1scanprosite:PS00639scanprosite:PS00640SMART:SM00645SMART:SM00848SMR:F4HZW2
SUPFAM:SSF54001TAIR:AT1G29110UniGene:At.51816UniProt:F4HZW2
Coordinates (TAIR10) chr1:+:10171683..10173071
Molecular Weight (calculated) 38077.20 Da
IEP (calculated) 7.15
GRAVY (calculated) -0.50
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSVRSVFVA LTILSMDLRI SQARPHVTLN EQSIVDYHQQ WMTQFSRVYK DESEKEMRLK VFKKNLKFIE NFNNMGNQSY TLGVNEFTDW KTEEFLATHT
101: GLRVNVTSLS ELFNKTKPSR NWNMSDIDME DESKDWRDEG AVTPVKYQGA CRLTKISGKN LLTLSEQQLI DCDIEKNGGC NGGEFEEAFK YIIKNGGVSL
201: ETEYPYQVKK ESCRANARRA PHTQIRGFQM VPSHNERALL EAVRRQPVSV LIDARADSFG HYKGGVYAGL DCGTDVNHAV TIVGYGTMSG LNYWVLKNSW
301: GESWGENGYM RIRRDVEWPQ GMCGIAQVAA YPVF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)