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AT1G29090.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G34080.1); Has 7810 Blast hits to 7748 proteins in 713 species: Archae - 51; Bacteria - 224; Metazoa - 3316; Fungi - 4; Plants - 1901; Viruses - 135; Other Eukaryotes - 2179 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G29090-MONOMEReggNOG:COG4870eggNOG:KOG1543EMBL:BT004146EMBL:CP002684EnsemblPlants:AT1G29090EnsemblPlants:AT1G29090.1
entrez:839784GeneID:839784GO:GO:0008234Gramene:AT1G29090.1hmmpanther:PTHR12411hmmpanther:PTHR12411:SF333HOGENOM:HOG000230773
InterPro:IPR000169InterPro:IPR000668InterPro:IPR013128InterPro:IPR013201InterPro:IPR025661KEGG:ath:AT1G29090MEROPS:C01.A15
OMA:FHEPIVAPANTHER:PTHR12411Pfam:PF00112Pfam:PF08246PhylomeDB:Q84W75PRINTS:PR00705PROSITE:PS00139
PROSITE:PS00640Proteomes:UP000006548RefSeq:NP_564321.2scanprosite:PS00139scanprosite:PS00640SMART:SM00645SMART:SM00848
SMR:Q84W75SUPFAM:SSF54001TAIR:AT1G29090UniGene:At.40814UniProt:Q84W75
Coordinates (TAIR10) chr1:-:10163103..10164385
Molecular Weight (calculated) 39939.10 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.36
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MCDSFINNKM TSILFMLVSL TILSMNLKVS QATSRVTFHE PIVAEHHQQW MTRFSRVYSD ELEKQMRFDV FKKNLKFIEK FNKKGDRTYK LGVNEFADWT
101: REEFIATHTG LKGVNGIPSS EFVDEMIPSW NWNVSDVAGR ETKDWRYEGA VTPVKYQGQC GCCWAFSSVA AVEGLTKIVG NNLVSLSEQQ LLDCDRERDN
201: GCNGGIMSDA FSYIIKNRGI ASEASYPYQA AEGTCRYNGK PSAWIRGFQT VPSNNERALL EAVSKQPVSV SIDADGPGFM HYSGGVYDEP YCGTNVNHAV
301: TFVGYGTSPE GIKYWLAKNS WGETWGENGY IRIRRDVAWP QGMCGVAQYA FYPVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)