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AT1G29080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Papain family cysteine protease
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G29090.1); Has 7819 Blast hits to 7758 proteins in 724 species: Archae - 63; Bacteria - 249; Metazoa - 3289; Fungi - 4; Plants - 1890; Viruses - 133; Other Eukaryotes - 2191 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1419-MONOMEReggNOG:COG4870eggNOG:KOG1543EMBL:AC021043EMBL:CP002684EMBL:DQ056468EnsemblPlants:AT1G29080
EnsemblPlants:AT1G29080.1entrez:839783GeneID:839783GO:GO:0008234Gramene:AT1G29080.1hmmpanther:PTHR12411hmmpanther:PTHR12411:SF333
HOGENOM:HOG000230773InterPro:IPR000169InterPro:IPR000668InterPro:IPR013128InterPro:IPR013201InterPro:IPR025660InterPro:IPR025661
KEGG:ath:AT1G29080MEROPS:I29.003OMA:HQQWMIQPANTHER:PTHR12411Pfam:PF00112Pfam:PF08246PhylomeDB:Q9LP39
PIR:C86413PRINTS:PR00705PROSITE:PS00139PROSITE:PS00639PROSITE:PS00640Proteomes:UP000006548RefSeq:NP_564320.1
scanprosite:PS00139scanprosite:PS00639scanprosite:PS00640SMART:SM00645SMART:SM00848SMR:Q9LP39SUPFAM:SSF54001
TAIR:AT1G29080UniGene:At.51814UniProt:Q9LP39
Coordinates (TAIR10) chr1:-:10157494..10158674
Molecular Weight (calculated) 38787.70 Da
IEP (calculated) 5.79
GRAVY (calculated) -0.30
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFVEFVCVV LTIFFMDLKI SEATSRVALY KPSSIVDYHQ QWMIQFSRVY DDEFEKQLRL QVLTENLKFI ESFNNMGNQS YKLGVNEFTD WTKEEFLATY
101: TGLRGVNVTS PFEVVNETKP AWNWTVSDVL GTNKDWRNEG AVTPVKSQGE CGGCWAFSAI AAVEGLTKIA RGNLISLSEQ QLLDCTREQN NGCKGGTFVN
201: AFNYIIKHRG ISSENEYPYQ VKEGPCRSNA RPAILIRGFE NVPSNNERAL LEAVSRQPVA VAIDASEAGF VHYSGGVYNA RNCGTSVNHA VTLVGYGTSP
301: EGMKYWLAKN SWGKTWGENG YIRIRRDVEW PQGMCGVAQY ASYPVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)