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AT1G28610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, carboxylesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28600.2); Has 2710 Blast hits to 2687 proteins in 65 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 2689; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G28610EnsemblPlants:AT1G28610.1entrez:839761hmmpanther:PTHR22835hmmpanther:PTHR22835:SF189
Coordinates (TAIR10) chr1:-:10054477..10055665
Molecular Weight (calculated) 27726.40 Da
IEP (calculated) 6.23
GRAVY (calculated) 0.24
Length 250 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLDSLVSF FLSTLFVTIV SSQTQCRNLE SIISFGDSIT DTGNLVGLSD RNHLPVTAFL PYGETFFHHP TGRSCNGRII IDFIAEFLGL PHVPPFYGSK
101: NGNFEKGVNF AVAGATALET SILEKRGIYY PHSNISLGIQ LKTFKESLPN LCGSPTDCRD MIGNAFIIMG EIGGNDFNFA FFVNKTSEVK ELVPLVITKI
201: SSAIVVNILD QRVPRTSNFF KKLLCFLFCF CVLVLNVESR SWSIWEEEHS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)