AT1G28530.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:10032127..10035496 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68460.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||
| Length | 614 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASISTASSS SSLLFPSRNF KSIPLLPQQR SSVSFVRCFS KNSSTEEDIL RFVAESDGKA LPCVRTYENN SARLSLVGTV AFDQALTAAA ADGGEAADDH 101: LRENVPVMVV ETVFPGGSDP KATVSTRLFL PTKKVKERAK RLRRSLSEDL SSGDLSKNIL AMTFRQVVLR QLWNFQLVLF APGAEREMGD FENPREQVST 201: SFTLSSSDER VISVIAEVIC ISALQSTEKH FLDDYLGKAK FPFMKWLSKR RRIASRDCSV VLHKLFDDEQ NTKLLLEYYQ SRKENFKLAD TKQRSRWWDL 301: SANSKLEKIG GPGFSSWASE YLPAYRLEMD STILADLKLE GWRKSSENKW EVLLTHSQMV GLAEALDIYF EDTYSLPRKQ LPCDVPGNYA NLPNEKKGLS 401: LLKFISVTMA SGIFLLAVSA AAQFCLPQKS ERKYPGKRQE ILWSESELLS HQSSDSSELD SFCGLLVNKL KDAYSWVGEI TLESSIGAWI GEVPDYLKET 501: SRAKSVEDHI VTSSSLLEIL NEDAKASAQD IATYQVVLSS EGKIIGFQPT SRVAVNHWAA NPLARELYGG KKLKPGLIEP GLKSHPPKKV VVLELLMSVN 601: SDRPFALVRP LLPQ |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)