suba logo
AT1G28390.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.969
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1); Has 101909 Blast hits to 100959 proteins in 2971 species: Archae - 79; Bacteria - 11366; Metazoa - 36596; Fungi - 8457; Plants - 30559; Viruses - 339; Other Eukaryotes - 14513 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G28390-MONOMERBioCyc:ARA:GQT-862-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC010155EMBL:AY075610
EMBL:CP002684EnsemblPlants:AT1G28390EnsemblPlants:AT1G28390.1entrez:839736ExpressionAtlas:Q9SGN7Gene3D:2.60.120.200GeneID:839736
Genevisible:Q9SGN7GO:GO:0004674GO:GO:0005524hmmpanther:PTHR27001hmmpanther:PTHR27001:SF240HOGENOM:HOG000116550InParanoid:Q9SGN7
IntAct:Q9SGN7InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441PaxDb:Q9SGN7
Pfam:PF00069Pfam:Q9SGN7Pfscan:PS50011PhylomeDB:Q9SGN7PRIDE:Q9SGN7PRO:PR:Q9SGN7PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SGN7Proteomes:UP000006548RefSeq:NP_174161.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9SGN7STRING:3702.AT1G28390.2SUPFAM:SSF56112TAIR:AT1G28390UniGene:At.22050UniProt:Q9SGN7
Coordinates (TAIR10) chr1:-:9966814..9968226
Molecular Weight (calculated) 53078.90 Da
IEP (calculated) 10.16
GRAVY (calculated) -0.40
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYLSCNGES AVAICDTYNW NPRRRSKVPE KRHPPKLRVF NYDELAVATN GFSANNFLGK GSHGRVYKAV LDDGKLLAAV KRTTITTTVG NNNNNVSQVD
101: NEIEILSRVR HRWMVNLIGY CVDHRRKTKL LVVEYMPNGT LHDQLHSRSS LDSRLSSWNR RIKHALQIAI AVHALHTAET QVIHRDIKSC NVLIDGDGNA
201: RLADFGLALI GNVDDERLKY TPPAGTLGYL DPSYLAPADL TAKSDVFSFG ILLLEIISGR EAIDLNYSPS CIVDWAVPLI KRGDYDAICD LKIKNRPYYA
301: VIRKLAVMAA RCVRSTAKKR PDMLEVVECL KTVRQLSPAW NKLRRRSEER SENVLAVEEE KEEIHVRIVR GGSRKNRKVS NVTTSVDDVY ERLVPEETLP
401: FRRRNFVLRS RSVGAKVGPD PYDGFGDETV VTMRLLIEKE RPVTTAAMRL SKSRSVGIVR SHKTASRKRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)