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AT1G28330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.817
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : dormancy-associated protein-like 1
Curator
Summary (TAIR10)
dormancy-associated protein (DRM1)
Computational
Description (TAIR10)
dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1ABeggNOG:ENOG410YV4VEMBL:AC021044EMBL:AF053746EMBL:AF053747EMBL:AK317149EMBL:AY037227
EMBL:AY074825EMBL:CP002684EnsemblPlants:AT1G28330EnsemblPlants:AT1G28330.1EnsemblPlants:AT1G28330.2EnsemblPlants:AT1G28330.3entrez:839729
ExpressionAtlas:B9DGG8GeneID:839729Gramene:AT1G28330.2Gramene:AT1G28330.3hmmpanther:PTHR33565hmmpanther:PTHR33565:SF2HOGENOM:HOG000272707
InParanoid:F4HWK9InterPro:IPR008406OMA:MHRSLTMPaxDb:F4HWK9Pfam:PF05564PhylomeDB:B9DGG8PIR:T52190
PRIDE:F4HWK9Proteomes:UP000006548RefSeq:NP_849720.1RefSeq:NP_849721.1STRING:3702.AT1G28330.5TAIR:AT1G28330tair10-symbols:DRM1
tair10-symbols:DYL1UniGene:At.25271UniGene:At.67880UniProt:O65923
Coordinates (TAIR10) chr1:-:9934252..9935216
Molecular Weight (calculated) 13406.90 Da
IEP (calculated) 10.71
GRAVY (calculated) -0.60
Length 122 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLLEKLWDD VVAGPQPDRG LGRLRKITTQ PINIRDIGEG SSSKVVMHRS LTMPAAVSPG TPTTPTTPTT PRKDNVWRSV FNPGSNLATR AIGSNIFDKP
101: THPNSPSVYD WLYSGDSRSQ HR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)