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AT1G28260.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
nucleus 0.955
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Telomerase activating protein Est1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 490 Blast hits to 489 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 120; Plants - 68; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410INQWeggNOG:ENOG410ZUHDEMBL:AC021044EMBL:BT004036EMBL:CP002684EnsemblPlants:AT1G28260EnsemblPlants:AT1G28260.1
EnsemblPlants:AT1G28260.2entrez:839720GeneID:839720Genevisible:Q9FZ99Gramene:AT1G28260.1Gramene:AT1G28260.2hmmpanther:PTHR15696
hmmpanther:PTHR15696:SF3HOGENOM:HOG000152595InParanoid:Q9FZ99InterPro:IPR011990InterPro:IPR018834InterPro:IPR019458KEGG:ath:AT1G28260
ncoils:CoilOMA:ESYQLMDPaxDb:Q9FZ99Pfam:PF10373Pfam:PF10374Pfam:Q9FZ99PhylomeDB:Q9FZ99
PIR:G86408PRIDE:Q9FZ99PRO:PR:Q9FZ99ProteinModelPortal:Q9FZ99Proteomes:UP000006548Reactome:R-ATH-975957RefSeq:NP_174147.1
RefSeq:NP_973927.1SMR:Q9FZ99STRING:3702.AT1G28260.1SUPFAM:SSF48452TAIR:AT1G28260UniGene:At.43752UniProt:Q9FZ99
Coordinates (TAIR10) chr1:-:9875776..9878782
Molecular Weight (calculated) 99788.90 Da
IEP (calculated) 6.55
GRAVY (calculated) -0.50
Length 880 amino acids
Sequence (TAIR10)
(BLAST)
001: MEANSADQKQ KPNFLVEVNN IEKQLWTLIH SKTILHTDVS ELYAKAGSTY EQIFKSNLQH EELQEVEFCL WKLHYKHIDE FRKGLKTNDH AKHMKAFKLF
101: LSKAAEFYQN LISKVRGYYH RLSEESGEQK SRFLCHRFYI CLGDLQRYQE QYLKAHEHPN WSTAATYYLE AAKSWPDSGN PHNQLAVLAT YVSDELLALY
201: HCVRSLAVKE PFPGASNNLL LLFEKNRSSP LQSLSTDAEF NYLNPSEKKV SVKERDLSKA KGELVAGIDL WPLVVRTTSF FFLKSSFDEF GRAFASTIRE
301: LDAAFAADDR NLEAMLESYQ FMDTARKGPY KILQIVAVFI YIFHNLAEAN GSDIVKEEVK LTNLALTMVF IVMGRVVERC LKTTPLDSCP LLPALLVFLD
401: YLPFLLDKVE EEEEECRFDE KSKSAISYFF GKLVDILNQL KVKDKNCPAK TLLALWEDHE LKSLAPLAPI HALLDFSSNM DLRESFDRGK ELRLQRIISS
501: AIDITTRQKK GSQKWLFFDN QRTHFYTTSG ELQSNGELFH GNGEGRNRKC VTIGPVEIIP LENERSVPVE EEEVILLKPL VRCQSAPIYS SGIAAKPLSS
601: DCTTSGNQTT TSNDSLRRTL SLIGSESFSF TQGLKDTDPQ HLHLEEGTVS GRPPSLSAWV VDKNKEKGRL GLSKPNGLGP IDETGPVSAF DSLSINSSTE
701: HPASSYSPPT PSAPLLPEDA SWFHNDASTN KAESFYDQTR YMELPGIMKP YTNPPFVGIS SSEWLRRYRE SRNLGPAYSY QAQGTNNLRN FMAHGSSKFS
801: LLARYGTPND SSQNSTFHPQ LYMEDHESRG EKLGNVQQST TNPYGFSDDP GPFLRFLREK EWLNENGQRL RGPPPAYMNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)