AT1G28260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Telomerase activating protein Est1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 490 Blast hits to 489 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 120; Plants - 68; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:9875776..9878782 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99788.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.55 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 880 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEANSADQKQ KPNFLVEVNN IEKQLWTLIH SKTILHTDVS ELYAKAGSTY EQIFKSNLQH EELQEVEFCL WKLHYKHIDE FRKGLKTNDH AKHMKAFKLF 101: LSKAAEFYQN LISKVRGYYH RLSEESGEQK SRFLCHRFYI CLGDLQRYQE QYLKAHEHPN WSTAATYYLE AAKSWPDSGN PHNQLAVLAT YVSDELLALY 201: HCVRSLAVKE PFPGASNNLL LLFEKNRSSP LQSLSTDAEF NYLNPSEKKV SVKERDLSKA KGELVAGIDL WPLVVRTTSF FFLKSSFDEF GRAFASTIRE 301: LDAAFAADDR NLEAMLESYQ FMDTARKGPY KILQIVAVFI YIFHNLAEAN GSDIVKEEVK LTNLALTMVF IVMGRVVERC LKTTPLDSCP LLPALLVFLD 401: YLPFLLDKVE EEEEECRFDE KSKSAISYFF GKLVDILNQL KVKDKNCPAK TLLALWEDHE LKSLAPLAPI HALLDFSSNM DLRESFDRGK ELRLQRIISS 501: AIDITTRQKK GSQKWLFFDN QRTHFYTTSG ELQSNGELFH GNGEGRNRKC VTIGPVEIIP LENERSVPVE EEEVILLKPL VRCQSAPIYS SGIAAKPLSS 601: DCTTSGNQTT TSNDSLRRTL SLIGSESFSF TQGLKDTDPQ HLHLEEGTVS GRPPSLSAWV VDKNKEKGRL GLSKPNGLGP IDETGPVSAF DSLSINSSTE 701: HPASSYSPPT PSAPLLPEDA SWFHNDASTN KAESFYDQTR YMELPGIMKP YTNPPFVGIS SSEWLRRYRE SRNLGPAYSY QAQGTNNLRN FMAHGSSKFS 801: LLARYGTPND SSQNSTFHPQ LYMEDHESRG EKLGNVQQST TNPYGFSDDP GPFLRFLREK EWLNENGQRL RGPPPAYMNN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)