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AT1G28250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.947
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:839719eggNOG:ENOG410J41SeggNOG:ENOG410YSY1EMBL:AC021044EMBL:AK119001EMBL:AY086367EMBL:BT005445
EMBL:CP002684EnsemblPlants:AT1G28250EnsemblPlants:AT1G28250.1entrez:839719GeneID:839719GO:GO:0016021Gramene:AT1G28250.1
HOGENOM:HOG000242263KEGG:ath:AT1G28250OMA:IHKPEATPIR:F86408Proteomes:UP000006548RefSeq:NP_564302.1STRING:3702.AT1G28250.1
TAIR:AT1G28250TMHMM:TMhelixUniGene:At.43304UniProt:Q9FZ98
Coordinates (TAIR10) chr1:+:9874296..9875175
Molecular Weight (calculated) 11159.90 Da
IEP (calculated) 7.36
GRAVY (calculated) 0.73
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKSQISST EAVFLGALAP GVNGPTWNTL RFAFLLLGLC LAFMLSVAFT SGQSMLLVHV GFLIVIASTL FILLNWFLAQ TGLVQVETQM QELNLLPNDK
101: TK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)