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AT1G27450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:22430844 (2012): Golgi
  • PMID:21531424 (2011): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:17644812 (2007): plasma membrane
  • PMID:16287169 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : adenine phosphoribosyl transferase 1
Curator
Summary (TAIR10)
Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP.
Computational
Description (TAIR10)
adenine phosphoribosyl transferase 1 (APT1); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: response to cadmium ion, adenine salvage; LOCATED IN: cytosol, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 3 (TAIR:AT4G22570.1); Has 9277 Blast hits to 9277 proteins in 2485 species: Archae - 216; Bacteria - 6424; Metazoa - 180; Fungi - 181; Plants - 165; Viruses - 0; Other Eukaryotes - 2111 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2837-MONOMERBioCyc:ARA:GQT-818-MONOMERBioCyc:MetaCyc:AT1G27450-MONOMERBioGrid:24871EC:2.4.2.7EMBL:AC004557EMBL:AF325045
EMBL:AY084300EMBL:AY128377EMBL:BT000370EMBL:CP002684EMBL:L19637EMBL:X58640EnsemblPlants:AT1G27450
EnsemblPlants:AT1G27450.1entrez:839636ExpressionAtlas:P31166Gene3D:3.40.50.2020GeneID:839636Genevisible:P31166GO:GO:0003999
GO:GO:0006168GO:GO:0009507GO:GO:0009690GO:GO:0044209gramene_pathway:2.4.2.7gramene_pathway:PWY-6605HAMAP:MF_00004
hmmpanther:PTHR11776hmmpanther:PTHR11776:SF8HOGENOM:HOG000036776InParanoid:P31166IntAct:P31166InterPro:IPR000836InterPro:IPR005764
InterPro:IPR029057KEGG:00230+2.4.2.7Pfam:P31166Pfam:PF00156PhylomeDB:P31166PIR:G86399PIR:S20867
PRIDE:P31166PRO:PR:P31166PROSITE:PS00103ProteinModelPortal:P31166Proteomes:UP000006548Reactome:R-ATH-74217RefSeq:NP_564284.1
RefSeq:NP_849714.1SMR:P31166SUPFAM:SSF53271TAIR:AT1G27450tair10-symbols:APT1tair10-symbols:ATAPT1TIGRfam:TIGR01090
TIGRFAMs:TIGR01090UniGene:At.25013UniPathway:UPA00588UniProt:P31166
Coordinates (TAIR10) chr1:+:9532042..9533807
Molecular Weight (calculated) 26397.50 Da
IEP (calculated) 8.64
GRAVY (calculated) 0.16
Length 243 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTIIISPLV SHRLCLARAV PCNRLLNNHH RAPPSIRLSN HRSTTSLRLF SSAAASRDSE MATEDVQDPR IAKIASSIRV IPDFPKPGIM FQDITTLLLD
101: TEAFKDTIAL FVDRYKDKGI SVVAGVEARG FIFGPPIALA IGAKFVPMRK PKKLPGKVIS EEYSLEYGTD TIEMHVGAVE PGERAIIIDD LIATGGTLAA
201: AIRLLERVGV KIVECACVIE LPELKGKEKL GETSLFVLVK SAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)