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AT1G27385.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.768
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWP0eggNOG:ENOG4112AINEMBL:AC004557EMBL:AK117980EMBL:AY087889EMBL:BT030634EMBL:CP002684
EnsemblPlants:AT1G27385EnsemblPlants:AT1G27385.1entrez:839628ExpressionAtlas:Q9FZJ7Gene3D:3.30.70.1460GeneID:839628Gramene:AT1G27385.1
hmmpanther:PTHR34782hmmpanther:PTHR34782:SF1InterPro:IPR007454InterPro:IPR027471Pfam:PF04359PhylomeDB:Q9FZJ7Proteomes:UP000006548
RefSeq:NP_564282.1SMR:Q9FZJ7STRING:3702.AT1G27385.4SUPFAM:SSF117991TAIR:AT1G27385UniGene:At.41084UniProt:Q9FZJ7
Coordinates (TAIR10) chr1:-:9511129..9512820
Molecular Weight (calculated) 22058.30 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.26
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MACKTILRSV FVSESRRTSG ARRCFFLPPS PASVPVHGLF PAPKSLCFNG FASVPERATR LNCSHNDQSD QGPPQEAVLK AISEVSKTDG RVGKTTNMII
101: GGTVADDSAK DWLELDQKVN TYPTERGFTA IGTGGNDFVH AMVVAVESVI DRQIPEDCVK QTLSSKGKYV SVNIGPIQVV SSEQVQAVYN AMRRDERMKY
201: FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)