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AT1G26920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J539eggNOG:ENOG41113DCEMBL:AC005508EMBL:AF370618EMBL:AY062864EMBL:AY081620EMBL:AY086400
EMBL:CP002684EnsemblPlants:AT1G26920EnsemblPlants:AT1G26920.1entrez:839582GeneID:839582Gramene:AT1G26920.1HOGENOM:HOG000152229
KEGG:ath:AT1G26920OMA:EKVMQHLPhylomeDB:Q9ZVG6PIR:B86396Proteomes:UP000006548RefSeq:NP_564266.1TAIR:AT1G26920
UniGene:At.21273UniProt:Q9ZVG6
Coordinates (TAIR10) chr1:+:9329584..9330105
Molecular Weight (calculated) 19537.70 Da
IEP (calculated) 3.67
GRAVY (calculated) -0.85
Length 173 amino acids
Sequence (TAIR10)
(BLAST)
001: MAETSDVSPL KRYREQETLV EEETNKRQKP TSSSSSASYN QILCLLNDSD EQNQHNNDLT SFINALQQEI SSDDQYAVVS ETSNVEDSFS SCVSSKEEEV
101: EDDSKEKVMQ HLLEASDDEL GIPNTDFGES NYEKANDGYV YGDSLLDGFG DAFWELEDEA ANYYTLLQSE LFM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)